RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PCDHA10Q9Y5I2 948 aa18.94■□□□□ 0.62
PDLIM7-201ENST00000355572 COL1A2P08123 1366 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 CYP3A7-CYP3A51PA0A087WV96 503 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 WNT7AO00755 349 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 MGEA5O60502 916 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 STBD1O95210 358 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 CYP3A7P24462 503 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 SLC26A2P50443 739 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 FOSBP53539 338 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 KRT76Q01546 638 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 C8orf34Q49A92 452 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 Q4G0T1 1027 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 LINC01465Q8N7H1 131 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 KIF2CQ99661 725 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 CELF4Q9BZC1 486 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 PADI3Q9ULW8 664 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 NOC2LQ9Y3T9 749 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 INSL6Q9Y581 213 aa18.93■□□□□ 0.62
PDLIM7-201ENST00000355572 MYO7AQ13402 2215 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 PSAPP07602 524 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 GATMP50440 423 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 CLCN3P51790 818 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 NR5A1Q13285 461 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 ZNF484Q5JVG2 852 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 LRCH2Q5VUJ6 765 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 RSPH3Q86UC2 560 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 SMAP1Q8IYB5 467 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 NSUN7Q8NE18 718 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 TNFRSF25Q93038 417 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 GTF3C6Q969F1 213 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 ZNF668Q96K58 619 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 SH2D3AQ9BRG2 576 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 DISC1Q9NRI5 854 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 THEGQ9P2T0 379 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 ORC3Q9UBD5 711 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 KDM3AQ9Y4C1 1321 aa18.92■□□□□ 0.62
PDLIM7-201ENST00000355572 BRWD1Q9NSI6 2320 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 EML1O00423 815 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 GAS7O60861 476 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 VTNP04004 478 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 NEK4P51957 841 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 NONOQ15233 471 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 CKAP2LQ8IYA6 745 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 BBXQ8WY36 941 aaPredicted RBP18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 CEP89Q96ST8 783 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 YME1L1Q96TA2 773 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 RIT2Q99578 217 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 TEKT3Q9BXF9 490 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 ERVK-5Q9HDB9 667 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 SAMM50Q9Y512 469 aa18.91■□□□□ 0.62
PDLIM7-201ENST00000355572 WDR64B1ANS9 1081 aa18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 GPR32O75388 356 aa18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 PRKCEQ02156 737 aa18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 DRP2Q13474 957 aa18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 KIZQ2M2Z5 673 aa18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 LETM2Q2VYF4 491 aa18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 EPC2Q52LR7 807 aa18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 IER5Q5VY09 327 aa18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 CPLX2Q6PUV4 134 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 LRRC71Q8N4P6 559 aa18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 ZNF689Q96CS4 500 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 GINS2Q9Y248 185 aa18.9■□□□□ 0.62
PDLIM7-201ENST00000355572 OATP04181 439 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 KCNQ1P51787 676 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 PIK3AP1Q6ZUJ8 805 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 KRT25Q7Z3Z0 450 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 FAM228AQ86W67 206 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 FBXO22Q8NEZ5 403 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 HAS1Q92839 578 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 OSMRQ99650 979 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 KCNMB3Q9NPA1 279 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 WRAP73Q9P2S5 460 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 DDX25Q9UHL0 483 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 VAV3Q9UKW4 847 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 SQORQ9Y6N5 450 aa18.89■□□□□ 0.61
PDLIM7-201ENST00000355572 CDKL5O76039 1030 aa18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 TARBP2Q15633 366 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 TJAP1Q5JTD0 557 aa18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 GALNT17Q6IS24 598 aa18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 MOXD1Q6UVY6 613 aa18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 MIER3Q7Z3K6 550 aa18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 BANK1Q8NDB2 785 aa18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 NECAB3Q96P71 396 aaPredicted RBP18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 ASB2Q96Q27 587 aa18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 HCSTQ9UBK5 93 aa18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 ADGRA3Q8IWK6 1321 aa18.88■□□□□ 0.61
PDLIM7-201ENST00000355572 XIRP2A4UGR9 3374 aa18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 GTPBP6O43824 516 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 DGKIO75912 1065 aa18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 PAK2Q13177 524 aa18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 ANKRD1Q15327 319 aa18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 NEK8Q86SG6 692 aa18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 TMEM192Q8IY95 271 aa18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 NME8Q8N427 588 aa18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 METTL13Q8N6R0 699 aa18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 C22orf23Q9BZE7 217 aa18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 TSPYL2Q9H2G4 693 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 ADAMTS10Q9H324 1103 aa18.87■□□□□ 0.61
PDLIM7-201ENST00000355572 CUL9Q8IWT3 2517 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms