RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 BZW1Q7L1Q6 419 aaKnown RBP13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 THAP11Q96EK4 314 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 TAF1BQ53T94 588 aaPredicted RBP13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 ENAHQ8N8S7 591 aaPredicted RBP13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 NACC1Q96RE7 527 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 MLXIPLQ9NP71 852 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 PCDHA1Q9Y5I3 950 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 TTC26A0AVF1 554 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 PLA2G4BP0C869 781 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 GPC5P78333 572 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 POLA2Q14181 598 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 LRRC14Q15048 493 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 BTBD6Q96KE9 485 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 PPME1Q9Y570 386 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 ZBED1O96006 694 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 CDC25AP30304 524 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 SERPINB10P48595 397 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 HIC1Q14526 733 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 TRIM67Q6ZTA4 783 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 LRRC1Q9BTT6 524 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 WDR11Q9BZH6 1224 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 KLC2Q9H0B6 622 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 WWP1Q9H0M0 922 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 STX18Q9P2W9 335 aaKnown RBP13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 GINS2Q9Y248 185 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 KDM5CP41229 1560 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 NCK2O43639 380 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 DEAF1O75398 565 aaPredicted RBP13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 ESRRBO95718 433 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 TAC1P20366 129 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 DAB2IPQ5VWQ8 1189 aa13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 PSPC1Q8WXF1 523 aaKnown RBP13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 MOV10L1Q9BXT6 1211 aaKnown RBP13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 ALDH8A1Q9H2A2 487 aaPredicted RBP13.61□□□□□ -0.23
SYNCRIP-201ENST00000355238 TRPM8Q7Z2W7 1104 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 LRRC47Q8N1G4 583 aaKnown RBP13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 ADPGKQ9BRR6 497 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 WDR62O43379 1518 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 TCP11X1B4DZS4 312 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 FAM107AO95990 144 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 NT5C2P49902 561 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 C3orf20Q8ND61 904 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 PRMT1Q99873 361 aaKnown RBP13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 EDEM3Q9BZQ6 932 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 PARVGQ9HBI0 331 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 SH3GLB2Q9NR46 395 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 DAB1O75553 588 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 STAT4Q14765 748 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 DNAL1Q4LDG9 190 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 TMTC4Q5T4D3 741 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 RASGRP2Q7LDG7 609 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 SNF8Q96H20 258 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 SUN2Q9UH99 717 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 L3MBTL1Q9Y468 752 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 TESPA1A2RU30 521 aaPredicted RBP13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 E9PMD0 336 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 GOLGA8SH3BPF8 625 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 TEX33O43247 280 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 ZRANB2O95218 330 aaKnown RBP eCLIP13.6□□□□□ -0.232e-7■■■□□ 17.4
SYNCRIP-201ENST00000355238 PDE8BO95263 885 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 OATP04181 439 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 TMED10P49755 219 aaKnown RBP13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 CCNYQ8ND76 341 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 FAF2Q96CS3 445 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 CYFIP2Q96F07 1278 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 PRPSAP2O60256 369 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 LPXNO60711 386 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 PRCPP42785 496 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 ARHGEF16Q5VV41 709 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 SGSM3Q96HU1 749 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 AIFM3Q96NN9 605 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 XPO6Q96QU8 1125 aaKnown RBP13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 AMNQ9BXJ7 453 aa13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 THRAP3Q9Y2W1 955 aaKnown RBP13.6□□□□□ -0.23
SYNCRIP-201ENST00000355238 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 SERPINB2P05120 415 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 TRPC1P48995 793 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 BCAMP50895 628 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 MRPS15P82914 257 aaKnown RBP13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 WDR19Q8NEZ3 1342 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 CCDC159P0C7I6 412 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 MORF4L2Q15014 288 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 KIF19Q2TAC6 998 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 CEP55Q53EZ4 464 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 DHX38Q92620 1227 aaKnown RBP13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 GLG1Q92896 1179 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 ATG3Q9NT62 314 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 PITPNM2Q9BZ72 1349 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 POLGP54098 1239 aaPredicted RBP13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 CNGA3Q16281 694 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 LONP2Q86WA8 852 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 STAG2Q8N3U4 1231 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 CCT8L1PA6NM43 557 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 CHN1P15882 459 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 KIF22Q14807 665 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 RABGAP1LQ5R372 815 aa13.59□□□□□ -0.23
SYNCRIP-201ENST00000355238 SH2D3CQ8N5H7 860 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms