RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 DNAJC3Q13217 504 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 DDIASQ8IXT1 998 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 DDHD1Q8NEL9 900 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 E5RI56 91 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 GADD45BO75293 160 aaPredicted RBP8.57□□□□□ -1.04
SCN8A-201ENST00000354534 RPS6KB1P23443 525 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 PMS2P54278 862 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 EIF3BP55884 814 aaKnown RBP8.57□□□□□ -1.04
SCN8A-201ENST00000354534 GALNT4Q8N4A0 578 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 GLG1Q92896 1179 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 PBXIP1Q96AQ6 731 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 CCDC127Q96BQ5 260 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 YIPF2Q9BWQ6 316 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 CXorf56Q9H5V9 222 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 RAD18Q9NS91 495 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 GTF2A1LQ9UNN4 478 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 GSPT1P15170 499 aaKnown RBP8.57□□□□□ -1.04
SCN8A-201ENST00000354534 EIF2B2P49770 351 aaKnown RBP8.57□□□□□ -1.04
SCN8A-201ENST00000354534 KRR1Q13601 381 aaKnown RBP8.57□□□□□ -1.04
SCN8A-201ENST00000354534 SHROOM1Q2M3G4 852 aaPredicted RBP8.57□□□□□ -1.04
SCN8A-201ENST00000354534 IFNL2Q8IZJ0 200 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 ANKRD13CQ8N6S4 541 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 JDP2Q8WYK2 163 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 PPP2R3BQ9Y5P8 575 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 WDR64B1ANS9 1081 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 GOLGA8TH3BQL2 631 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 CLASP2O75122 1294 aaKnown RBP8.57□□□□□ -1.04
SCN8A-201ENST00000354534 COX10Q12887 443 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 SRLQ86TD4 932 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 NUP93Q8N1F7 819 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 PLEKHA8Q96JA3 519 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 NYXQ9GZU5 481 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 ARMCX3Q9UH62 379 aaPredicted RBP8.57□□□□□ -1.04
SCN8A-201ENST00000354534 PCDHGB4Q9UN71 923 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 IBTKQ9P2D0 1353 aaPredicted RBP8.57□□□□□ -1.04
SCN8A-201ENST00000354534 IPO5O00410 1097 aaKnown RBP8.57□□□□□ -1.04
SCN8A-201ENST00000354534 TRIM49P0CI25 452 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 TRIM49CP0CI26 452 aa8.57□□□□□ -1.04
SCN8A-201ENST00000354534 RSPH10B2B2RC85 870 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 ATP8B1O43520 1251 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 PDE5AO76074 875 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 CFBP00751 764 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 RSPH10BP0C881 870 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 ARL4AP40617 200 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 GYS2P54840 703 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 SLFNL1Q499Z3 407 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 C11orf74Q86VG3 221 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 AGR3Q8TD06 166 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 NLRP3Q96P20 1036 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 INTS13Q9NVM9 706 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 KLHL20Q9Y2M5 609 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 hCG_1642624A0A1W2PR95 340 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 PIPSLA2A3N6 862 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 KPNA7A9QM74 516 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 FOXO3O43524 673 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 GUCY1B2O75343 617 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 KRT16P08779 473 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 ARF3P61204 181 aaPredicted RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 ARF1P84077 181 aaKnown RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 SGSM1Q2NKQ1 1148 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 MFSD4BQ5TF39 518 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 CENPPQ6IPU0 288 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 ARL8AQ96BM9 186 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 MYLK2Q9H1R3 596 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 SENP1Q9P0U3 644 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 YWHABP31946 246 aaKnown RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 FAF2Q96CS3 445 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 SLC13A1Q9BZW2 595 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 PIGUQ9H490 435 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 NCOA5Q9HCD5 579 aaKnown RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 MYCP01106 439 aaPredicted RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 MYL7Q01449 175 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 EXOC3L4Q17RC7 722 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 HDHD2Q9H0R4 259 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 SCN3BQ9NY72 215 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 XPO1O14980 1071 aaKnown RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 H2AFZP0C0S5 128 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 IL12RB1P42701 662 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 ZNF445P59923 1031 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 ITGB3BPQ13352 177 aaPredicted RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 ARMCX4Q5H9R4 360 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 TBC1D9BQ66K14 1250 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 H2AFVQ71UI9 128 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 TEX2Q8IWB9 1127 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 MICALL2Q8IY33 904 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 PDCD6IPQ8WUM4 868 aaKnown RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 TMEM87BQ96K49 555 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 AFF4Q9UHB7 1163 aaKnown RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 STRNO43815 780 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 GAS7O60861 476 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 PAPOLAP51003 745 aaKnown RBP8.56□□□□□ -1.04
SCN8A-201ENST00000354534 PWP1Q13610 501 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 ARMCX5Q6P1M9 558 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 NLRX1Q86UT6 975 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 BRIP1Q9BX63 1249 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 CDC23Q9UJX2 597 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 IPPQ9Y573 584 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 ZFYVE9O95405 1425 aa8.56□□□□□ -1.04
SCN8A-201ENST00000354534 TECP42680 631 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms