RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 CACNB3P54284 484 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 ERVK-9P63128 1117 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 SHROOM1Q2M3G4 852 aaPredicted RBP13.24□□□□□ -0.29
DDX4-201ENST00000353507 PACS2Q86VP3 889 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 ZFPM1Q8IX07 1006 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 SYCE1Q8N0S2 351 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 LRRC57Q8N9N7 239 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 TPCN2Q8NHX9 752 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 MKL1Q969V6 931 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 CALR3Q96L12 384 aaKnown RBP13.24□□□□□ -0.29
DDX4-201ENST00000353507 ATP6V1G3Q96LB4 118 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 RNPC3Q96LT9 517 aaKnown RBP13.24□□□□□ -0.29
DDX4-201ENST00000353507 AP1M1Q9BXS5 423 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 CENPHQ9H3R5 247 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 HMGB1P1B2RPK0 211 aaPredicted RBP13.23□□□□□ -0.29
DDX4-201ENST00000353507 FAM86B1E9PN63 330 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 FAM86B2P0C5J1 330 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 SREBF1P36956 1147 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 CASP4P49662 377 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 BMT2Q1RMZ1 405 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 DPY19L2P1Q6NXN4 242 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 CRYGNQ8WXF5 182 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 PIK3R5Q8WYR1 880 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 LRRC45Q96CN5 670 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.23□□□□□ -0.29
DDX4-201ENST00000353507 FBXL5Q9UKA1 691 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 POLRMTO00411 1230 aaKnown RBP13.23□□□□□ -0.29
DDX4-201ENST00000353507 KRIT1O00522 736 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 FAM13AO94988 1023 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 FERP16591 822 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 RBM5P52756 815 aaKnown RBP eCLIP13.23□□□□□ -0.29
DDX4-201ENST00000353507 B4GALNT4Q76KP1 1039 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 DAAM2Q86T65 1068 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 U2AF1L4Q8WU68 220 aaKnown RBP13.23□□□□□ -0.29
DDX4-201ENST00000353507 SLC35C1Q96A29 364 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 LENG9Q96B70 501 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 P2RX7Q99572 595 aaKnown RBP13.23□□□□□ -0.29
DDX4-201ENST00000353507 RUSC1Q9BVN2 902 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 TMX4Q9H1E5 349 aaPredicted RBP13.23□□□□□ -0.29
DDX4-201ENST00000353507 EFCC1Q9HA90 598 aa13.23□□□□□ -0.29
DDX4-201ENST00000353507 SIPA1L1O43166 1804 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 ATP8B3O60423 1300 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 CCDC188H7C350 402 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 MSH4O15457 936 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 ERLIN2O94905 339 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 STAT1P42224 750 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 LIG3P49916 1009 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 GJB7Q6PEY0 223 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 METTL13Q8N6R0 699 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 EIF1ADQ8N9N8 165 aaKnown RBP13.22□□□□□ -0.29
DDX4-201ENST00000353507 SCFD2Q8WU76 684 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 DDX47Q9H0S4 455 aaKnown RBP13.22□□□□□ -0.29
DDX4-201ENST00000353507 POLD4Q9HCU8 107 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 PI4KBQ9UBF8 816 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 F5H6K3 240 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 SART1O43290 800 aaKnown RBP13.22□□□□□ -0.29
DDX4-201ENST00000353507 GFPT2O94808 682 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 KIAA0754O94854 1291 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 EYA4O95677 639 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 GAP43P17677 238 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 LSP1P33241 339 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 JAM2P57087 298 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 GUCY1A3Q02108 690 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 KLRC3Q07444 240 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 SYDE2Q5VT97 1194 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 EIF2AK1Q9BQI3 630 aaKnown RBP13.22□□□□□ -0.29
DDX4-201ENST00000353507 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
DDX4-201ENST00000353507 AJAP1Q9UKB5 411 aaPredicted RBP13.22□□□□□ -0.29
DDX4-201ENST00000353507 A0A0A6YYK5 440 aaPredicted RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 GTPBP10A4D1E9 387 aaKnown RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 GDF11O95390 407 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 CPP00450 1065 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 MYZAPP0CAP1 466 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 HOXA13P31271 388 aaPredicted RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 LRIG3Q6UXM1 1119 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 TMEM179Q6ZVK1 233 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 FAM186BQ8IYM0 893 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 POLR3CQ9BUI4 534 aaPredicted RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 VAV3Q9UKW4 847 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 INTUQ9ULD6 942 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 KLRG2A4D1S0 409 aaPredicted RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 DDTLA6NHG4 134 aaPredicted RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 PPP1R37O75864 691 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 INPP5BP32019 993 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 HPDP32754 393 aaPredicted RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 CTNNA1P35221 906 aaKnown RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 HSD17B3P37058 310 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 KCNA1Q09470 495 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 MYCT1Q8N699 235 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 ARFGAP2Q8N6H7 521 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 C1orf131Q8NDD1 294 aaKnown RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 CCDC26Q8TAB7 109 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 OLFML3Q9NRN5 406 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 RGL1Q9NZL6 768 aa13.21□□□□□ -0.29
DDX4-201ENST00000353507 SUCLA2Q9P2R7 463 aaPredicted RBP13.21□□□□□ -0.29
DDX4-201ENST00000353507 SFI1A8K8P3 1242 aa13.2□□□□□ -0.3
DDX4-201ENST00000353507 DDX3XO00571 662 aaKnown RBP eCLIP13.2□□□□□ -0.3
DDX4-201ENST00000353507 NDUFB10O96000 172 aa13.2□□□□□ -0.3
DDX4-201ENST00000353507 TAL1P17542 331 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms