RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 LDHAP00338 332 aaKnown RBP20.05■□□□□ 0.8
UBE3C-201ENST00000348165 PRR29P0C7W0 189 aa20.05■□□□□ 0.8
UBE3C-201ENST00000348165 COASYQ13057 564 aa20.05■□□□□ 0.8
UBE3C-201ENST00000348165 ARMCX2Q7L311 632 aa20.05■□□□□ 0.8
UBE3C-201ENST00000348165 NGRNQ9NPE2 291 aaKnown RBP20.05■□□□□ 0.8
UBE3C-201ENST00000348165 SPATS2LQ9NUQ6 558 aaKnown RBP20.05■□□□□ 0.8
UBE3C-201ENST00000348165 RASSF2P50749 326 aa20.05■□□□□ 0.8
UBE3C-201ENST00000348165 RBBP5Q15291 538 aaKnown RBP20.05■□□□□ 0.8
UBE3C-201ENST00000348165 RRP15Q9Y3B9 282 aaKnown RBP20.05■□□□□ 0.8
UBE3C-201ENST00000348165 TXNDC9O14530 226 aa20.05■□□□□ 0.8
UBE3C-201ENST00000348165 PPP1R2P3Q6NXS1 205 aa20.05■□□□□ 0.8
UBE3C-201ENST00000348165 ZNF34Q8IZ26 560 aa20.05■□□□□ 0.8
UBE3C-201ENST00000348165 FAM213AQ9BRX8 229 aa20.05■□□□□ 0.8
UBE3C-201ENST00000348165 CPSF3Q9UKF6 684 aaKnown RBP20.05■□□□□ 0.8
UBE3C-201ENST00000348165 DAGLAQ9Y4D2 1042 aa20.05■□□□□ 0.8
UBE3C-201ENST00000348165 HOXA7P31268 230 aaPredicted RBP20.05■□□□□ 0.8
UBE3C-201ENST00000348165 QARSP47897 775 aaKnown RBP20.05■□□□□ 0.8
UBE3C-201ENST00000348165 DHX9Q08211 1270 aaKnown RBP20.05■□□□□ 0.8
UBE3C-201ENST00000348165 RPUSD2Q8IZ73 545 aaKnown RBP20.05■□□□□ 0.8
UBE3C-201ENST00000348165 PHLPP2Q6ZVD8 1323 aa20.05■□□□□ 0.8
UBE3C-201ENST00000348165 CAMTA2O94983 1202 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 GARSP41250 739 aaKnown RBP20.04■□□□□ 0.8
UBE3C-201ENST00000348165 C10orf76Q5T2E6 689 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 PPP1R18Q6NYC8 613 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 RAPH1Q70E73 1250 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 SRBD1Q8N5C6 995 aaKnown RBP20.04■□□□□ 0.8
UBE3C-201ENST00000348165 LRRC8CQ8TDW0 803 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 PLA2G12BQ9BX93 195 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 NUF2Q9BZD4 464 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 DENND3A2RUS2 1198 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 KIF28PB7ZC32 967 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 PEX19P40855 299 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 APOBEC3FQ8IUX4 373 aaKnown RBP20.04■□□□□ 0.8
UBE3C-201ENST00000348165 PBKQ96KB5 322 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 FAM167AQ96KS9 214 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 PRKAG2Q9UGJ0 569 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 SLC12A6Q9UHW9 1150 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 PVALEFA0A1B0GWK0 134 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 XPAP23025 273 aaPredicted RBP20.04■□□□□ 0.8
UBE3C-201ENST00000348165 EPHB4P54760 987 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 SF3B3Q15393 1217 aaKnown RBP20.04■□□□□ 0.8
UBE3C-201ENST00000348165 MUM1L1Q5H9M0 696 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 INTS9Q9NV88 658 aaKnown RBP20.04■□□□□ 0.8
UBE3C-201ENST00000348165 P4HBP07237 508 aaKnown RBP20.04■□□□□ 0.8
UBE3C-201ENST00000348165 HMGCS2P54868 508 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 CLEC10AQ8IUN9 316 aa20.04■□□□□ 0.8
UBE3C-201ENST00000348165 IPO11Q9UI26 975 aaKnown RBP20.04■□□□□ 0.8
UBE3C-201ENST00000348165 HERC5Q9UII4 1024 aaKnown RBP20.04■□□□□ 0.8
UBE3C-201ENST00000348165 KCNH2Q12809 1159 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 RNF139Q8WU17 664 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 INPP5FQ9Y2H2 1132 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 JCADQ9P266 1359 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 EIF3CLB5ME19 914 aaKnown RBP20.03■□□□□ 0.8
UBE3C-201ENST00000348165 SLCO1A2P46721 670 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 MRPS25P82663 173 aaKnown RBP20.03■□□□□ 0.8
UBE3C-201ENST00000348165 EIF3CQ99613 913 aaKnown RBP20.03■□□□□ 0.8
UBE3C-201ENST00000348165 LGALS16A8MUM7 142 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 CPP00450 1065 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 APBA1Q02410 837 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 ARHGEF18Q6ZSZ5 1173 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 PSPC1Q8WXF1 523 aaKnown RBP20.03■□□□□ 0.8
UBE3C-201ENST00000348165 SLC7A5Q01650 507 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 ZNF568Q3ZCX4 644 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 LDHDQ86WU2 507 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 RNF14Q9UBS8 474 aa20.03■□□□□ 0.8
UBE3C-201ENST00000348165 ZWILCHQ9H900 591 aa20.02■□□□□ 0.8
UBE3C-201ENST00000348165 ZNF302Q9NR11 478 aa20.02■□□□□ 0.8
UBE3C-201ENST00000348165 ESYT2A0FGR8 921 aa20.02■□□□□ 0.8
UBE3C-201ENST00000348165 TWF2Q6IBS0 349 aaKnown RBP20.02■□□□□ 0.8
UBE3C-201ENST00000348165 ADAM22Q9P0K1 906 aa20.02■□□□□ 0.8
UBE3C-201ENST00000348165 ZBTB12Q9Y330 459 aaPredicted RBP20.02■□□□□ 0.8
UBE3C-201ENST00000348165 FOXN1O15353 648 aa20.02■□□□□ 0.8
UBE3C-201ENST00000348165 VPS72Q15906 364 aa20.02■□□□□ 0.8
UBE3C-201ENST00000348165 MXD3Q9BW11 206 aa20.02■□□□□ 0.8
UBE3C-201ENST00000348165 ARHGEF37A1IGU5 675 aa20.02■□□□□ 0.79
UBE3C-201ENST00000348165 ZWINTO95229 277 aa20.02■□□□□ 0.79
UBE3C-201ENST00000348165 LINC00116Q8NCU8 138 aa20.02■□□□□ 0.79
UBE3C-201ENST00000348165 GIMAP8Q8ND71 665 aaPredicted RBP20.02■□□□□ 0.79
UBE3C-201ENST00000348165 LXNQ9BS40 222 aa20.02■□□□□ 0.79
UBE3C-201ENST00000348165 ACAD9Q9H845 621 aa20.02■□□□□ 0.79
UBE3C-201ENST00000348165 TBK1Q9UHD2 729 aa20.02■□□□□ 0.79
UBE3C-201ENST00000348165 SRGAP2BP0DMP2 458 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 RHPN2Q8IUC4 686 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 PASD1Q8IV76 773 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 HDAC11Q96DB2 347 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 ADGRB3O60242 1522 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 HSPA6P17066 643 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 KNOP1Q1ED39 458 aaKnown RBP20.01■□□□□ 0.79
UBE3C-201ENST00000348165 CRAMP1Q96RY5 1269 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 TACO1Q9BSH4 297 aaKnown RBP20.01■□□□□ 0.79
UBE3C-201ENST00000348165 DNAJC17Q9NVM6 304 aaKnown RBP20.01■□□□□ 0.79
UBE3C-201ENST00000348165 BBS9Q3SYG4 887 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 MYLK4Q86YV6 388 aaPredicted RBP20.01■□□□□ 0.79
UBE3C-201ENST00000348165 RPAP3Q9H6T3 665 aaPredicted RBP20.01■□□□□ 0.79
UBE3C-201ENST00000348165 BCORL1Q5H9F3 1711 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 GPC4O75487 556 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 EXOSC10Q01780 885 aaKnown RBP20.01■□□□□ 0.79
UBE3C-201ENST00000348165 PPP6R3Q5H9R7 873 aaPredicted RBP20.01■□□□□ 0.79
UBE3C-201ENST00000348165 SHC4Q6S5L8 630 aa20.01■□□□□ 0.79
UBE3C-201ENST00000348165 LRRC53A6NM62 1247 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms