RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 MDM2Q00987 491 aaPredicted RBP15.94■□□□□ 0.14
NUP50-201ENST00000347635 GLG1Q92896 1179 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 TSNARE1Q96NA8 513 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 MXD3Q9BW11 206 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 NRBP2Q9NSY0 501 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 PDXDC2PQ6P474 469 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 EXOC8Q8IYI6 725 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 TDRD3Q9H7E2 651 aaKnown RBP15.94■□□□□ 0.14
NUP50-201ENST00000347635 RBM12Q9NTZ6 932 aaKnown RBP15.94■□□□□ 0.14
NUP50-201ENST00000347635 RAB21Q9UL25 225 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 KIF13AQ9H1H9 1805 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 MAGOHP61326 146 aaKnown RBP15.94■□□□□ 0.14
NUP50-201ENST00000347635 TROAPQ12815 778 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 DPH6Q7L8W6 267 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 ZNF653Q96CK0 615 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 EPN3Q9H201 632 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 PARVGQ9HBI0 331 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 NOC2LQ9Y3T9 749 aaKnown RBP15.94■□□□□ 0.14
NUP50-201ENST00000347635 SART1O43290 800 aaKnown RBP15.94■□□□□ 0.14
NUP50-201ENST00000347635 TROVE2P10155 538 aaKnown RBP eCLIP15.94■□□□□ 0.14
NUP50-201ENST00000347635 CORO7P57737 925 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 CDC37Q16543 378 aaPredicted RBP15.94■□□□□ 0.14
NUP50-201ENST00000347635 SFR1Q86XK3 245 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 DDX47Q9H0S4 455 aaKnown RBP15.94■□□□□ 0.14
NUP50-201ENST00000347635 UBE2TQ9NPD8 197 aaPredicted RBP15.94■□□□□ 0.14
NUP50-201ENST00000347635 RAB20Q9NX57 234 aa15.94■□□□□ 0.14
NUP50-201ENST00000347635 GRIN3BO60391 1043 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 MMEP08473 750 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 IRAK1P51617 712 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 NAALADL2Q58DX5 795 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 PAPD7Q5XG87 772 aaKnown RBP15.93■□□□□ 0.14
NUP50-201ENST00000347635 HACE1Q8IYU2 909 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 TMEM60Q9H2L4 133 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 C1orf112Q9NSG2 853 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 CD2APQ9Y5K6 639 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 TCRBV5S4A2TA0A5A2 114 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 ZBTB5O15062 677 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 NR3C1P04150 777 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 AP3B2Q13367 1082 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 SGO2Q562F6 1265 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 RHOT2Q8IXI1 618 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 SPICE1Q8N0Z3 855 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 SH2D3CQ8N5H7 860 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 SLC10A4Q96EP9 437 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 ERGIC2Q96RQ1 377 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 SMARCAL1Q9NZC9 954 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 STXBP3O00186 592 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 CHUKO15111 745 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 TNNI1P19237 187 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 ABCD1P33897 745 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 HERVK_113P62684 666 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 FEM1BQ9UK73 627 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 POTEB3A0JP26 581 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 POTECB2RU33 542 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 PPP1R37O75864 691 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 RPSAP08865 295 aaKnown RBP15.93■□□□□ 0.14
NUP50-201ENST00000347635 CHRNA5P30532 468 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 IL9RQ01113 521 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 POTEBQ6S5H4 581 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.93■□□□□ 0.14
NUP50-201ENST00000347635 CCDC127Q96BQ5 260 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 BHMT2Q9H2M3 363 aa15.93■□□□□ 0.14
NUP50-201ENST00000347635 ENTPD3O75355 529 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 PDIA5Q14554 519 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 SLC18A3Q16572 532 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 HIBCHQ6NVY1 386 aaPredicted RBP15.92■□□□□ 0.14
NUP50-201ENST00000347635 ARHGAP24Q8N264 748 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 MICAL1Q8TDZ2 1067 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 RNF181Q9P0P0 153 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 FBXO40Q9UH90 709 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 MEFVO15553 781 aaPredicted RBP15.92■□□□□ 0.14
NUP50-201ENST00000347635 GH2P01242 217 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 GYS1P13807 737 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 RPS12P25398 132 aaKnown RBP15.92■□□□□ 0.14
NUP50-201ENST00000347635 MDH1P40925 334 aaKnown RBP15.92■□□□□ 0.14
NUP50-201ENST00000347635 KNOP1Q1ED39 458 aaKnown RBP15.92■□□□□ 0.14
NUP50-201ENST00000347635 ATP6V0A1Q93050 837 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 NACC1Q96RE7 527 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 SLITRK6Q9H5Y7 841 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 DNAJC12Q9UKB3 198 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 RCSD1Q6JBY9 416 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 C2orf69Q8N8R5 385 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 CCDC89Q8N998 374 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 NEDD1Q8NHV4 660 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 ZNF577Q9BSK1 485 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 GUCY2CP25092 1073 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 SNX1Q13596 522 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 VPS52Q8N1B4 723 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 HOXC10Q9NYD6 342 aa15.92■□□□□ 0.14
NUP50-201ENST00000347635 PODXLO00592 558 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 HDLBPQ00341 1268 aaKnown RBP15.91■□□□□ 0.14
NUP50-201ENST00000347635 FBXL5Q9UKA1 691 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 SYNGAP1Q96PV0 1343 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 FRMD3A2A2Y4 597 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 CCND2P30279 289 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 PHBP35232 272 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 ZKSCAN8Q15776 578 aaPredicted RBP15.91■□□□□ 0.14
NUP50-201ENST00000347635 ARHGEF18Q6ZSZ5 1173 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 ZBTB8OSQ8IWT0 167 aa15.91■□□□□ 0.14
NUP50-201ENST00000347635 ACCSQ96QU6 501 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms