RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 MSH2P43246 934 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 TOB1P50616 345 aaPredicted RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 DRAP1Q14919 205 aaPredicted RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 SH2D4BQ5SQS7 431 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 MCTP2Q6DN12 878 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 HVCN1Q96D96 273 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 SCYL1Q96KG9 808 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 DBR1Q9UK59 544 aaKnown RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 HMGB1P1B2RPK0 211 aaPredicted RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 SLC16A4O15374 487 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 ATMINO43313 823 aaPredicted RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 TMEM191BP0C7N4 346 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 STAT2P52630 851 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 NCAPG2Q86XI2 1143 aa11.31□□□□□ -0.6
SMG7-201ENST00000347615 PRMT1Q99873 361 aaKnown RBP11.31□□□□□ -0.6
SMG7-201ENST00000347615 ZNF335Q9H4Z2 1342 aaPredicted RBP11.3□□□□□ -0.6
SMG7-201ENST00000347615 CA4P22748 312 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 POLE2P56282 527 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 CCDC14Q49A88 953 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 MMS22LQ6ZRQ5 1243 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 ANKRD35Q8N283 1001 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 P3H4Q92791 437 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 SAYSD1Q9NPB0 183 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 SALL3Q9BXA9 1300 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 INHBAP08476 426 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 RASIP1Q5U651 963 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 NPHP4O75161 1426 aaPredicted RBP11.3□□□□□ -0.6
SMG7-201ENST00000347615 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
SMG7-201ENST00000347615 PIK3R2O00459 728 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 AKR1B1P15121 316 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 PHBP35232 272 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 Q3C1V9 767 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 FOXR1Q6PIV2 292 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 DGKHQ86XP1 1220 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 SPATS2Q86XZ4 545 aaKnown RBP11.3□□□□□ -0.6
SMG7-201ENST00000347615 SLC30A5Q8TAD4 765 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 TRIM9Q9C026 710 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 VCXQ9H320 206 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 SNX12Q9UMY4 172 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 LEMD3Q9Y2U8 911 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
SMG7-201ENST00000347615 CROCCP2Q86T23 111 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 PFDN4Q9NQP4 134 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 TYW1Q9NV66 732 aaKnown RBP11.3□□□□□ -0.6
SMG7-201ENST00000347615 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.3□□□□□ -0.6
SMG7-201ENST00000347615 MYMKA6NI61 221 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 PMS2P54278 862 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 MDM1Q8TC05 714 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 MAIP1Q8WWC4 291 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 ACCSQ96QU6 501 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 TDRD3Q9H7E2 651 aaKnown RBP11.3□□□□□ -0.6
SMG7-201ENST00000347615 IQGAP1P46940 1657 aa11.3□□□□□ -0.6
SMG7-201ENST00000347615 ZC3H13Q5T200 1668 aaKnown RBP11.3□□□□□ -0.6
SMG7-201ENST00000347615 ADGRL3Q9HAR2 1447 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 GMNCA6NCL1 334 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 TOM1L1O75674 476 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 FTLP02792 175 aaPredicted RBP11.29□□□□□ -0.6
SMG7-201ENST00000347615 SRGAP2CP0DJJ0 459 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 PDCD7Q8N8D1 485 aaKnown RBP11.29□□□□□ -0.6
SMG7-201ENST00000347615 TTC17Q96AE7 1141 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 MAP3K14Q99558 947 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 VCX3BQ9H321 246 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 EAPPQ56P03 285 aaPredicted RBP11.29□□□□□ -0.6
SMG7-201ENST00000347615 EARS2Q5JPH6 523 aaKnown RBP11.29□□□□□ -0.6
SMG7-201ENST00000347615 PDXDC1Q6P996 788 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 ADSSL1Q8N142 457 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 C7orf31Q8N865 590 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 SSX2IPQ9Y2D8 614 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 GOLGA8RI6L899 631 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 SLC9A1P19634 815 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 GRM4Q14833 912 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 PTPAQ15257 358 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 MDH1BQ5I0G3 518 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 ZIM3Q96PE6 472 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 SETBP1Q9Y6X0 1596 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 PPP2R2AP63151 447 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 BRDTQ58F21 947 aaPredicted RBP11.29□□□□□ -0.6
SMG7-201ENST00000347615 ATP6V1G3Q96LB4 118 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 MED10Q9BTT4 135 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 PITPNM3Q9BZ71 974 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 YIPF3Q9GZM5 350 aa11.29□□□□□ -0.6
SMG7-201ENST00000347615 RASA4BC9J798 803 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 RASA4O43374 803 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 MYL1P05976 194 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 TAL1P17542 331 aaPredicted RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 HADHQ16836 314 aaKnown RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 ELMO3Q96BJ8 720 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 NACC1Q96RE7 527 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 NUP85Q9BW27 656 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 TAF1DQ9H5J8 278 aaPredicted RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 INO80B-WBP1J3KQ70 363 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 RAD51CO43502 376 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 PSMD2Q13200 908 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 LONRF1Q17RB8 773 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 LGSNQ5TDP6 509 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms