RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SLC27A3Q5K4L6 730 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 PPP1R18Q6NYC8 613 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 C1orf186Q6ZWK4 172 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 TPH2Q8IWU9 490 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 ZDHHC14Q8IZN3 488 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 RDH13Q8NBN7 331 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 PSMD1Q99460 953 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 FEZ2Q9UHY8 353 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-201ENST00000347613 TRAF3IP3Q9Y228 551 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 C10orf71Q711Q0 1435 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 SSU72P8A0A1W2PR75 194 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 PSMD10O75832 226 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 NAP1L1P55209 391 aaKnown RBP6.63□□□□□ -1.35
CLCN3-201ENST00000347613 SYDE2Q5VT97 1194 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 FBXO11Q86XK2 927 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 KAT5Q92993 513 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 ARHGEF26Q96DR7 871 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 WNK4Q96J92 1243 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 TMEM39BQ9GZU3 492 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 EPB41L5Q9HCM4 733 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 PSD3Q9NYI0 1048 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 NAGPAQ9UK23 515 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 TMEM59LQ9UK28 342 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 COG5Q9UP83 839 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 PCDHGC5Q9Y5F6 944 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 ABCB11O95342 1321 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 DDX39AO00148 427 aaKnown RBP6.63□□□□□ -1.35
CLCN3-201ENST00000347613 TACC1O75410 805 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 RAD17O75943 681 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 NR3C1P04150 777 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 PRLRP16471 622 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 ERVK-9P63128 1117 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 GUCY2DQ02846 1103 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 KLHL30Q0D2K2 578 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 MAPK7Q13164 816 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 SEMA3FQ13275 785 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 POTEAQ6S8J7 498 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 KLHL7Q8IXQ5 586 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 MSL3Q8N5Y2 521 aaKnown RBP6.63□□□□□ -1.35
CLCN3-201ENST00000347613 FAM71BQ8TC56 605 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 IFT81Q8WYA0 676 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 MASTLQ96GX5 879 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 AGBL1Q96MI9 1066 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 CSRNP1Q96S65 589 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 SH3GL2Q99962 352 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 CELF4Q9BZC1 486 aaKnown RBP6.63□□□□□ -1.35
CLCN3-201ENST00000347613 UNC45AQ9H3U1 944 aa6.63□□□□□ -1.35
CLCN3-201ENST00000347613 LAMA2P24043 3122 aaKnown RBP6.63□□□□□ -1.35
CLCN3-201ENST00000347613 DCDC2CA8MYV0 355 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 C21orf2O43822 256 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 GFPT2O94808 682 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 GCNT3O95395 438 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 HLA-DOAP06340 250 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 ITGB5P18084 799 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 NT5C2P49902 561 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 IKQ13123 557 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-201ENST00000347613 UAP1Q16222 522 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-201ENST00000347613 C1orf220Q5T0J3 134 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 STRIP1Q5VSL9 837 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 PHLDB3Q6NSJ2 640 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 KCTD17Q8N5Z5 321 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 DCAF4Q8WV16 495 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 SYT11Q9BT88 431 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 AMNQ9BXJ7 453 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 ERVK-5Q9HDB9 667 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 GDF3Q9NR23 364 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 STIM2Q9P246 746 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 PPP1R9AQ9ULJ8 1098 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 USP20Q9Y2K6 914 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 SUGT1Q9Y2Z0 365 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 POTEB2H3BUK9 544 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 ERLIN1O75477 346 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 APBA3O96018 575 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 BMP3P12645 472 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 INPP5BP32019 993 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 SOX10P56693 466 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 SLC9C1Q4G0N8 1177 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 MUM1L1Q5H9M0 696 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 PODNQ7Z5L7 613 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 ADAT2Q7Z6V5 191 aaKnown RBP6.62□□□□□ -1.35
CLCN3-201ENST00000347613 CCDC65Q8IXS2 484 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 METTL13Q8N6R0 699 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 GMCL1P1Q8NEA9 526 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 SLC30A5Q8TAD4 765 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 LMO3Q8TAP4 145 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 CCDC47Q96A33 483 aaKnown RBP6.62□□□□□ -1.35
CLCN3-201ENST00000347613 CEP63Q96MT8 703 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 WDR11Q9BZH6 1224 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 PGAP2Q9UHJ9 254 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 FAM184BQ9ULE4 1060 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 STXBP5LQ9Y2K9 1186 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 ZNF536O15090 1300 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 ASTN2O75129 1339 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-201ENST00000347613 WDR81Q562E7 1941 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 KRT18P05783 430 aaKnown RBP6.62□□□□□ -1.35
CLCN3-201ENST00000347613 GCFC2P16383 781 aaKnown RBP6.62□□□□□ -1.35
CLCN3-201ENST00000347613 CIITAP33076 1130 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 GLYCTKQ8IVS8 523 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 IQCKQ8N0W5 287 aa6.62□□□□□ -1.35
CLCN3-201ENST00000347613 SLC20A1Q8WUM9 679 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms