RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 POLD4Q9HCU8 107 aa21.18■□□□□ 0.98
CHMP4A-201ENST00000347519 ARHGEF35A5YM69 484 aa21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 H3BRB1 525 aa21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 GTPBP6O43824 516 aaPredicted RBP21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 RINT1Q6NUQ1 792 aa21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 KANK3Q6NY19 840 aa21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 RBM43Q6ZSC3 357 aaKnown RBP21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 C7orf25Q9BPX7 421 aa21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 NIFKQ9BYG3 293 aaKnown RBP21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 TRIM9Q9C026 710 aa21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 GZF1Q9H116 711 aaPredicted RBP21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 TUT1Q9H6E5 874 aaKnown RBP21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 PAK6Q9NQU5 681 aaPredicted RBP21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 ERAP1Q9NZ08 941 aa21.17■□□□□ 0.98
CHMP4A-201ENST00000347519 ZBTB42B2RXF5 422 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 F2P00734 622 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 MYCNP04198 464 aaPredicted RBP21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 PURAQ00577 322 aaKnown RBP21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 CACNB1Q02641 598 aaPredicted RBP21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 LRRC41Q15345 812 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 TARBP2Q15633 366 aaKnown RBP21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 MTERF2Q49AM1 385 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 PADI6Q6TGC4 694 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 C1orf186Q6ZWK4 172 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 DYMQ7RTS9 669 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 DNAJC19Q96DA6 116 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 CEP170P1Q96L14 293 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 SPC25Q9HBM1 224 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 NRBP2Q9NSY0 501 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 BMP2KQ9NSY1 1161 aaPredicted RBP21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 PCDHA5Q9Y5H7 936 aa21.16■□□□□ 0.98
CHMP4A-201ENST00000347519 HAS3O00219 553 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 KLRC4O43908 158 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 MSCO60682 206 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 CST5P28325 142 aaPredicted RBP21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 PSEN2P49810 448 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 SLC26A2P50443 739 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 RAD51AP2Q09MP3 1159 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 KCNA10Q16322 511 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 PKN2Q16513 984 aaKnown RBP21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 ZSCAN23Q3MJ62 389 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 BRDTQ58F21 947 aaPredicted RBP21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 CXCL17Q6UXB2 119 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 OTUD6AQ7L8S5 288 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 TRAPPC12Q8WVT3 735 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 BBXQ8WY36 941 aaPredicted RBP21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 DDX12PQ92771 950 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 SYAP1Q96A49 352 aaPredicted RBP21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 ARMC5Q96C12 935 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 ZNF333Q96JL9 665 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 FAM167AQ96KS9 214 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 CYP26B1Q9NR63 512 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 SCN10AQ9Y5Y9 1956 aa21.15■□□□□ 0.98
CHMP4A-201ENST00000347519 USO1O60763 962 aaKnown RBP21.14■□□□□ 0.98
CHMP4A-201ENST00000347519 ZBTB10Q96DT7 871 aa21.14■□□□□ 0.98
CHMP4A-201ENST00000347519 DEFB118Q96PH6 123 aa21.14■□□□□ 0.98
CHMP4A-201ENST00000347519 RNF208Q9H0X6 261 aa21.14■□□□□ 0.98
CHMP4A-201ENST00000347519 KIAA1468Q9P260 1216 aa21.14■□□□□ 0.98
CHMP4A-201ENST00000347519 ZNF215Q9UL58 517 aaPredicted RBP21.14■□□□□ 0.98
CHMP4A-201ENST00000347519 TRPC6Q9Y210 931 aa21.14■□□□□ 0.98
CHMP4A-201ENST00000347519 RSPH10B2B2RC85 870 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 HBP1O60381 514 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 ASGR1P07306 291 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 RSPH10BP0C881 870 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 INSRRP14616 1297 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 SARSP49591 514 aaKnown RBP21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 CHMP4BP1P59074 171 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 GIT2Q14161 759 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 MFSD10Q14728 455 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 KIAA0753Q2KHM9 967 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 CNNM4Q6P4Q7 775 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 MAEAQ7L5Y9 396 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 SPATA20Q8TB22 786 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 REEP2Q9BRK0 252 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 MTG1Q9BT17 334 aaPredicted RBP21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 PDLIM7Q9NR12 457 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 TUBE1Q9UJT0 475 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 MYH11P35749 1972 aa21.13■□□□□ 0.97
CHMP4A-201ENST00000347519 SYCE3A1L190 88 aa21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 KPNA6O60684 536 aa21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 SOX10P56693 466 aa21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 ASIC1P78348 528 aa21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 AMPD3Q01432 767 aa21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 HIC1Q14526 733 aa21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 DAW1Q8N136 415 aa21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 KAT6AQ92794 2004 aa21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 CCDC43Q96MW1 224 aaKnown RBP21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 XPNPEP1Q9NQW7 623 aa21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 MAN1B1Q9UKM7 699 aa21.12■□□□□ 0.97
CHMP4A-201ENST00000347519 BIN1O00499 593 aa21.11■□□□□ 0.97
CHMP4A-201ENST00000347519 RPN1P04843 607 aaKnown RBP21.11■□□□□ 0.97
CHMP4A-201ENST00000347519 MAPK7Q13164 816 aa21.11■□□□□ 0.97
CHMP4A-201ENST00000347519 ISM2Q6H9L7 571 aa21.11■□□□□ 0.97
CHMP4A-201ENST00000347519 RNF180Q86T96 592 aa21.11■□□□□ 0.97
CHMP4A-201ENST00000347519 SMARCE1Q969G3 411 aa21.11■□□□□ 0.97
CHMP4A-201ENST00000347519 GPRC5CQ9NQ84 441 aa21.11■□□□□ 0.97
CHMP4A-201ENST00000347519 HOOK1Q9UJC3 728 aaKnown RBP21.11■□□□□ 0.97
CHMP4A-201ENST00000347519 TRIP12Q14669 1992 aaPredicted RBP21.11■□□□□ 0.97
CHMP4A-201ENST00000347519 EVPLQ92817 2033 aa21.11■□□□□ 0.97
CHMP4A-201ENST00000347519 ZEB2O60315 1214 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms