RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 TPH2Q8IWU9 490 aa12.92□□□□□ -0.34
APP-201ENST00000346798 TPCN2Q8NHX9 752 aa12.92□□□□□ -0.34
APP-201ENST00000346798 RBM17Q96I25 401 aaKnown RBP12.92□□□□□ -0.34
APP-201ENST00000346798 LRRC4CQ9HCJ2 640 aa12.92□□□□□ -0.34
APP-201ENST00000346798 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
APP-201ENST00000346798 ATP8A1Q9Y2Q0 1164 aa12.92□□□□□ -0.34
APP-201ENST00000346798 MAST2Q6P0Q8 1798 aa12.92□□□□□ -0.34
APP-201ENST00000346798 TLDC2A0PJX2 215 aa12.92□□□□□ -0.34
APP-201ENST00000346798 SPDYE3A6NKU9 549 aa12.92□□□□□ -0.34
APP-201ENST00000346798 FAM86B1E9PN63 330 aa12.92□□□□□ -0.34
APP-201ENST00000346798 LRRN2O75325 713 aa12.92□□□□□ -0.34
APP-201ENST00000346798 FAM86B2P0C5J1 330 aa12.92□□□□□ -0.34
APP-201ENST00000346798 TRIM49P0CI25 452 aa12.92□□□□□ -0.34
APP-201ENST00000346798 TRIM49CP0CI26 452 aa12.92□□□□□ -0.34
APP-201ENST00000346798 HNRNPH1P31943 449 aaKnown RBP12.92□□□□□ -0.34
APP-201ENST00000346798 DHX9Q08211 1270 aaKnown RBP12.92□□□□□ -0.34
APP-201ENST00000346798 IFFO1Q0D2I5 559 aa12.92□□□□□ -0.34
APP-201ENST00000346798 COG2Q14746 738 aa12.92□□□□□ -0.34
APP-201ENST00000346798 UAP1Q16222 522 aaPredicted RBP12.92□□□□□ -0.34
APP-201ENST00000346798 KRT71Q3SY84 523 aa12.92□□□□□ -0.34
APP-201ENST00000346798 MMS22LQ6ZRQ5 1243 aa12.92□□□□□ -0.34
APP-201ENST00000346798 MYCBPAPQ8TBZ2 947 aa12.92□□□□□ -0.34
APP-201ENST00000346798 ISCUQ9H1K1 167 aa12.92□□□□□ -0.34
APP-201ENST00000346798 PDE4CQ08493 712 aa12.92□□□□□ -0.34
APP-201ENST00000346798 KIAA0825Q8IV33 1275 aa12.92□□□□□ -0.34
APP-201ENST00000346798 MYCT1Q8N699 235 aa12.92□□□□□ -0.34
APP-201ENST00000346798 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
APP-201ENST00000346798 ZC3H12CQ9C0D7 883 aaKnown RBP12.92□□□□□ -0.34
APP-201ENST00000346798 GAKO14976 1311 aa12.92□□□□□ -0.34
APP-201ENST00000346798 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
APP-201ENST00000346798 DDX3XO00571 662 aaKnown RBP eCLIP12.91□□□□□ -0.348e-27■■■■□ 24.4
APP-201ENST00000346798 GALCP54803 685 aa12.91□□□□□ -0.34
APP-201ENST00000346798 ITGB3BPQ13352 177 aaPredicted RBP12.91□□□□□ -0.34
APP-201ENST00000346798 TBC1D10BQ4KMP7 808 aaPredicted RBP12.91□□□□□ -0.34
APP-201ENST00000346798 CDC42EP5Q6NZY7 148 aa12.91□□□□□ -0.34
APP-201ENST00000346798 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.91□□□□□ -0.34
APP-201ENST00000346798 KCNQ5Q9NR82 932 aa12.91□□□□□ -0.34
APP-201ENST00000346798 MEFVO15553 781 aaPredicted RBP12.91□□□□□ -0.34
APP-201ENST00000346798 CALUO43852 315 aaPredicted RBP12.91□□□□□ -0.34
APP-201ENST00000346798 IFI16Q16666 785 aaKnown RBP12.91□□□□□ -0.34
APP-201ENST00000346798 EDRF1Q3B7T1 1238 aa12.91□□□□□ -0.34
APP-201ENST00000346798 GPATCH11Q8N954 259 aa12.91□□□□□ -0.34
APP-201ENST00000346798 KCNMB3Q9NPA1 279 aa12.91□□□□□ -0.34
APP-201ENST00000346798 HMGB1P1B2RPK0 211 aaPredicted RBP12.9□□□□□ -0.34
APP-201ENST00000346798 EVI5O60447 810 aa12.9□□□□□ -0.34
APP-201ENST00000346798 SPATA31C1P0DKV0 1188 aa12.9□□□□□ -0.34
APP-201ENST00000346798 ECHS1P30084 290 aa12.9□□□□□ -0.34
APP-201ENST00000346798 HSPA9P38646 679 aaKnown RBP12.9□□□□□ -0.34
APP-201ENST00000346798 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.34
APP-201ENST00000346798 ZNF844Q08AG5 666 aa12.9□□□□□ -0.34
APP-201ENST00000346798 LRRC57Q8N9N7 239 aa12.9□□□□□ -0.34
APP-201ENST00000346798 MDM1Q8TC05 714 aa12.9□□□□□ -0.34
APP-201ENST00000346798 MAGOHBQ96A72 148 aaKnown RBP12.9□□□□□ -0.34
APP-201ENST00000346798 TMBIM4Q9HC24 238 aa12.9□□□□□ -0.34
APP-201ENST00000346798 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
APP-201ENST00000346798 IGKV6D-41A0A0C4DH26 115 aa12.9□□□□□ -0.34
APP-201ENST00000346798 MEIS2O14770 477 aa12.9□□□□□ -0.34
APP-201ENST00000346798 FAM13AO94988 1023 aa12.9□□□□□ -0.34
APP-201ENST00000346798 USP8P40818 1118 aa12.9□□□□□ -0.34
APP-201ENST00000346798 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
APP-201ENST00000346798 AADACL2Q6P093 401 aa12.9□□□□□ -0.34
APP-201ENST00000346798 GLG1Q92896 1179 aa12.9□□□□□ -0.34
APP-201ENST00000346798 SLC35C1Q96A29 364 aa12.9□□□□□ -0.34
APP-201ENST00000346798 LRRC45Q96CN5 670 aa12.9□□□□□ -0.34
APP-201ENST00000346798 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.34
APP-201ENST00000346798 PBKQ96KB5 322 aa12.9□□□□□ -0.34
APP-201ENST00000346798 TMOD4Q9NZQ9 345 aa12.9□□□□□ -0.34
APP-201ENST00000346798 PKD2L1Q9P0L9 805 aa12.9□□□□□ -0.34
APP-201ENST00000346798 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
APP-201ENST00000346798 EML1O00423 815 aa12.9□□□□□ -0.34
APP-201ENST00000346798 BUB1BO60566 1050 aaPredicted RBP12.9□□□□□ -0.34
APP-201ENST00000346798 KRT13P13646 458 aa12.9□□□□□ -0.34
APP-201ENST00000346798 STAT1P42224 750 aa12.9□□□□□ -0.34
APP-201ENST00000346798 EPHA7Q15375 998 aa12.9□□□□□ -0.34
APP-201ENST00000346798 PPP1R18Q6NYC8 613 aa12.9□□□□□ -0.34
APP-201ENST00000346798 FRMD5Q7Z6J6 570 aa12.9□□□□□ -0.34
APP-201ENST00000346798 SLFN12Q8IYM2 578 aa12.9□□□□□ -0.34
APP-201ENST00000346798 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
APP-201ENST00000346798 DBNDD1Q9H9R9 158 aa12.9□□□□□ -0.34
APP-201ENST00000346798 PPP1R9AQ9ULJ8 1098 aa12.9□□□□□ -0.34
APP-201ENST00000346798 RABGAP1Q9Y3P9 1069 aa12.9□□□□□ -0.34
APP-201ENST00000346798 CDK5RAP2Q96SN8 1893 aa12.89□□□□□ -0.35
APP-201ENST00000346798 ASTN1O14525 1302 aa12.89□□□□□ -0.35
APP-201ENST00000346798 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
APP-201ENST00000346798 KCNV1Q6PIU1 500 aa12.89□□□□□ -0.35
APP-201ENST00000346798 IPO4Q8TEX9 1081 aaKnown RBP12.89□□□□□ -0.35
APP-201ENST00000346798 LRRC4BQ9NT99 713 aa12.89□□□□□ -0.35
APP-201ENST00000346798 AMFRQ9UKV5 643 aa12.89□□□□□ -0.35
APP-201ENST00000346798 RPL13P26373 211 aaKnown RBP12.89□□□□□ -0.35
APP-201ENST00000346798 NOVP48745 357 aa12.89□□□□□ -0.35
APP-201ENST00000346798 MARSP56192 900 aaKnown RBP12.89□□□□□ -0.35
APP-201ENST00000346798 CERKLQ49MI3 558 aaPredicted RBP12.89□□□□□ -0.35
APP-201ENST00000346798 HYIQ5T013 277 aa12.89□□□□□ -0.35
APP-201ENST00000346798 FAM186BQ8IYM0 893 aa12.89□□□□□ -0.35
APP-201ENST00000346798 MREGQ8N565 214 aa12.89□□□□□ -0.35
APP-201ENST00000346798 SLC35G2Q8TBE7 412 aa12.89□□□□□ -0.35
APP-201ENST00000346798 TAS2R14Q9NYV8 317 aa12.89□□□□□ -0.35
APP-201ENST00000346798 CNOT8Q9UFF9 292 aaKnown RBP12.89□□□□□ -0.35
APP-201ENST00000346798 UTP11Q9Y3A2 253 aaKnown RBP12.89□□□□□ -0.35
APP-201ENST00000346798 SBF2Q86WG5 1849 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms