RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 TEX33O43247 280 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 ZNF862O60290 1169 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 USO1O60763 962 aaKnown RBP23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 MYBP10242 640 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 INHBEP58166 350 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 MAPK7Q13164 816 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 KNOP1Q1ED39 458 aaKnown RBP23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 METTL7BQ6UX53 244 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 ANO5Q75V66 913 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 ZNF467Q7Z7K2 595 aaPredicted RBP23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 FAM178BQ8IXR5 827 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 GPBP1L1Q9HC44 474 aaPredicted RBP23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 POLD4Q9HCU8 107 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 DDX41Q9UJV9 622 aaKnown RBP23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 TELO2Q9Y4R8 837 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 TLL2Q9Y6L7 1015 aa23.72■■□□□ 1.39
TSPAN3-202ENST00000346495 STBD1O95210 358 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 GGPS1O95749 300 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 PBX1P40424 430 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 EDRF1Q3B7T1 1238 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 ODR4Q5SWX8 454 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 PLA2G4FQ68DD2 849 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 LRRC55Q6ZSA7 311 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 GPR142Q7Z601 462 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 CEP63Q96MT8 703 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 TUBGCP2Q9BSJ2 902 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 MLXIPQ9HAP2 919 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 ZNF302Q9NR11 478 aa23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 LARSQ9P2J5 1176 aaKnown RBP23.71■■□□□ 1.39
TSPAN3-202ENST00000346495 IGKV6D-21A0A0A0MT36 114 aa23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 IGF2BP3O00425 579 aaKnown RBP eCLIP23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 PRPF6O94906 941 aaKnown RBP23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 MAPTP10636 758 aaKnown RBP23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 MTIF2P46199 727 aaKnown RBP23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 PRKCEQ02156 737 aa23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 TBX2Q13207 712 aaPredicted RBP23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 GRB14Q14449 540 aa23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 XKR3Q5GH77 459 aa23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 ARMCX2Q7L311 632 aa23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 PLEKHH3Q7Z736 793 aa23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 FBXO16Q8IX29 292 aaPredicted RBP23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 DAW1Q8N136 415 aa23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 DRC1Q96MC2 740 aa23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 TRAF3IP3Q9Y228 551 aa23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 MAFBQ9Y5Q3 323 aaPredicted RBP23.7■■□□□ 1.39
TSPAN3-202ENST00000346495 ADGRA2Q96PE1 1338 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 ZNF236Q9UL36 1845 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 TMEM150BA6NC51 233 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 LGALS16A8MUM7 142 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 PDXKO00764 312 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 CALUO43852 315 aaPredicted RBP23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 NPEPPSP55786 919 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 LY6KQ17RY6 165 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 ZNF720Q7Z2F6 126 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 SMC1BQ8NDV3 1235 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 CEP170P1Q96L14 293 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 FIZ1Q96SL8 496 aa23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 DIS3Q9Y2L1 958 aaKnown RBP23.7■■□□□ 1.38
TSPAN3-202ENST00000346495 ITIH6Q6UXX5 1313 aa23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 GSTTP1A0A1W2PQM5 241 aa23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 ARIH2O95376 493 aa23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 SFPQP23246 707 aaKnown RBP eCLIP23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 NMT1P30419 496 aaKnown RBP23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 LRMPQ12912 555 aa23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 ARID5BQ14865 1188 aa23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 TAF1CQ15572 869 aaPredicted RBP23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 CELF3Q5SZQ8 465 aaKnown RBP23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 ZC3H3Q8IXZ2 948 aaKnown RBP23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 SEPT1Q8WYJ6 367 aa23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 CCDC102AQ96A19 550 aa23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 EEF2KMTQ96G04 330 aa23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 TYW1Q9NV66 732 aaKnown RBP23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 SEPT9Q9UHD8 586 aaPredicted RBP23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 PCDHB13Q9Y5F0 798 aa23.69■■□□□ 1.38
TSPAN3-202ENST00000346495 GNA14O95837 355 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 PLS3P13797 630 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 PRKCSHP14314 528 aaPredicted RBP23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 HOXD13P35453 343 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 ALCAMQ13740 583 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 TTLL4Q14679 1199 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 PTPN21Q16825 1174 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 FAM160B1Q5W0V3 765 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 ARMCX5Q6P1M9 558 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 CCDC62Q6P9F0 684 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 MAEAQ7L5Y9 396 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 TRMT1LQ7Z2T5 733 aaKnown RBP23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 DPP9Q86TI2 863 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 IFNL1Q8IU54 200 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 SCFD2Q8WU76 684 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 SH2D3AQ9BRG2 576 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 VTA1Q9NP79 307 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 CPA4Q9UI42 421 aa23.68■■□□□ 1.38
TSPAN3-202ENST00000346495 SLC15A5A6NIM6 579 aa23.67■■□□□ 1.38
TSPAN3-202ENST00000346495 DNM2P50570 870 aa23.67■■□□□ 1.38
TSPAN3-202ENST00000346495 UBXN1Q04323 297 aa23.67■■□□□ 1.38
TSPAN3-202ENST00000346495 RRAGDQ9NQL2 400 aaPredicted RBP23.67■■□□□ 1.38
TSPAN3-202ENST00000346495 KIF3CO14782 793 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 CETN3O15182 167 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 NRDCO43847 1150 aa23.66■■□□□ 1.38
TSPAN3-202ENST00000346495 DGAT1O75907 488 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms