RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 KPNB1Q14974 876 aaKnown RBP20.69■□□□□ 0.9
HDAC4-201ENST00000345617 C4orf50Q6ZRC1 276 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 OLA1Q9NTK5 396 aaKnown RBP20.69■□□□□ 0.9
HDAC4-201ENST00000345617 KIF23Q02241 960 aaPredicted RBP20.69■□□□□ 0.9
HDAC4-201ENST00000345617 HIC1Q14526 733 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 DNAL1Q4LDG9 190 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 AP3B1O00203 1094 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 HSPA1AP0DMV8 641 aaKnown RBP20.69■□□□□ 0.9
HDAC4-201ENST00000345617 HSPA1BP0DMV9 641 aaKnown RBP20.69■□□□□ 0.9
HDAC4-201ENST00000345617 ZNF711Q9Y462 761 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 WDR47O94967 919 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 KCNJ6P48051 423 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 SLC12A1Q13621 1099 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 SSH3Q8TE77 659 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 SLC7A3Q8WY07 619 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 THAP11Q96EK4 314 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 TRIM8Q9BZR9 551 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 NRBP1Q9UHY1 535 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 CTIFO43310 598 aaKnown RBP20.69■□□□□ 0.9
HDAC4-201ENST00000345617 PDIA3P30101 505 aaKnown RBP20.69■□□□□ 0.9
HDAC4-201ENST00000345617 EIF6P56537 245 aaKnown RBP20.69■□□□□ 0.9
HDAC4-201ENST00000345617 HDLBPQ00341 1268 aaKnown RBP20.69■□□□□ 0.9
HDAC4-201ENST00000345617 CALN1Q9BXU9 219 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 DHX34Q14147 1143 aaKnown RBP20.68■□□□□ 0.9
HDAC4-201ENST00000345617 OTUD7BQ6GQQ9 843 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 TTC8Q8TAM2 541 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 CEP72Q9P209 647 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 MOCS3O95396 460 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 CCDC15Q0P6D6 951 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 UHMK1Q8TAS1 419 aaKnown RBP20.68■□□□□ 0.9
HDAC4-201ENST00000345617 IRAK4Q9NWZ3 460 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 ORC2Q13416 577 aaPredicted RBP20.68■□□□□ 0.9
HDAC4-201ENST00000345617 ZNF827Q17R98 1081 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 ABHD10Q9NUJ1 306 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 SMG5Q9UPR3 1016 aaKnown RBP20.68■□□□□ 0.9
HDAC4-201ENST00000345617 PFASO15067 1338 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 TBC1D9BQ66K14 1250 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 CCDC127Q96BQ5 260 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 PHACTR3Q96KR7 559 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 PNMA6EA0A0J9YXQ4 647 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 DDIT3P35638 169 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 SH3GL2Q99962 352 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 GOLPH3LQ9H4A5 285 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 SH3GLB2Q9NR46 395 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 STMN3Q9NZ72 180 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 LRRN2O75325 713 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 RSRC2Q7L4I2 434 aaKnown RBP20.68■□□□□ 0.9
HDAC4-201ENST00000345617 TNKSO95271 1327 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 PRDM1O75626 825 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 SNF8Q96H20 258 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 FAM129AQ9BZQ8 928 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 CLIC4Q9Y696 253 aa20.68■□□□□ 0.9
HDAC4-201ENST00000345617 ATP7AQ04656 1500 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 CCNYQ8ND76 341 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 SNX25Q9H3E2 840 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 MICAL3Q7RTP6 2002 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 AGGF1Q8N302 714 aaeCLIP20.67■□□□□ 0.91e-9■■■■□ 24.6
HDAC4-201ENST00000345617 ACRBPQ8NEB7 543 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 FAM89AQ96GI7 184 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 SLC24A3Q9HC58 644 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 LRRIQ4A6NIV6 560 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 PSMA3P25788 255 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 CTSWP56202 376 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 TRAPPC3LQ5T215 181 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 SYDE1Q6ZW31 735 aaPredicted RBP20.67■□□□□ 0.9
HDAC4-201ENST00000345617 C19orf60Q96EN9 201 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 STAP2Q9UGK3 403 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 FAM95CA0A1B0GW59 222 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 E7ENQ6 273 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 CAPRIN1Q14444 709 aaKnown RBP20.67■□□□□ 0.9
HDAC4-201ENST00000345617 NDUFA13Q9P0J0 144 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 ADCY3O60266 1144 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 ANGPTL8Q6UXH0 198 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 IFNL3Q8IZI9 196 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 GOLGA8RI6L899 631 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 WWP1Q9H0M0 922 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 IL1RAPL1Q9NZN1 696 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 MAN1B1Q9UKM7 699 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 SNX2O60749 519 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 PDCLQ13371 301 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 ATP11CQ8NB49 1132 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 NRBP2Q9NSY0 501 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 PDP2Q9P2J9 529 aa20.67■□□□□ 0.9
HDAC4-201ENST00000345617 MMP1P03956 469 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 AASDHQ4L235 1098 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■■■□□ 14.7
HDAC4-201ENST00000345617 SLC8A2Q9UPR5 921 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 TBC1D4O60343 1298 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 MYBL1P10243 752 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 PSMA4P25789 261 aaKnown RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 HSPA9P38646 679 aaKnown RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 NLRP11P59045 1033 aaKnown RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 OSBPL3Q9H4L5 887 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 C11orf57Q6ZUT1 292 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 PLD3Q8IV08 490 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 SPHKAPQ2M3C7 1700 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 CDC42BPAQ5VT25 1732 aa20.66■□□□□ 0.9
HDAC4-201ENST00000345617 TESPA1A2RU30 521 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 KHDRBS2Q5VWX1 349 aaKnown RBP20.66■□□□□ 0.9
HDAC4-201ENST00000345617 POLD1P28340 1107 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms