RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 HIPK4Q8NE63 616 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 UPF3AQ9H1J1 476 aaKnown RBP19.39■□□□□ 0.69
SMC4-201ENST00000344722 DNAJC12Q9UKB3 198 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 H3BQF6 201 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 SEC24CP53992 1094 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 GPATCH4Q5T3I0 446 aaKnown RBP19.39■□□□□ 0.69
SMC4-201ENST00000344722 ENGASEQ8NFI3 743 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 POMGNT1Q8WZA1 660 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 MOV10L1Q9BXT6 1211 aaKnown RBP19.39■□□□□ 0.69
SMC4-201ENST00000344722 AMACRQ9UHK6 382 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 NEDD4P46934 1319 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 CFLARO15519 480 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 TNNC2P02585 160 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 NLRX1Q86UT6 975 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 PIH1D3Q9NQM4 214 aaKnown RBP19.39■□□□□ 0.69
SMC4-201ENST00000344722 ADGRL3Q9HAR2 1447 aa19.39■□□□□ 0.69
SMC4-201ENST00000344722 SRGNP10124 158 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 DNAJC9Q8WXX5 260 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 TTC1Q99614 292 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 RPS8P62241 208 aaKnown RBP19.38■□□□□ 0.69
SMC4-201ENST00000344722 CNBD1Q8NA66 436 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 DCTN4Q9UJW0 460 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 TRAF3IP3Q9Y228 551 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 SLC4A7Q9Y6M7 1214 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 MAP3K15Q6ZN16 1313 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 NVLO15381 856 aaKnown RBP19.38■□□□□ 0.69
SMC4-201ENST00000344722 CHURC1Q8WUH1 139 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 SNF8Q96H20 258 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 BAG5Q9UL15 447 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 MXI1P50539 228 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 PFKFB3Q16875 520 aaPredicted RBP19.38■□□□□ 0.69
SMC4-201ENST00000344722 KRT39Q6A163 491 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 RAPH1Q70E73 1250 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 NSMCE1Q8WV22 266 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 PIGSQ96S52 555 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 RBM12Q9NTZ6 932 aaKnown RBP19.38■□□□□ 0.69
SMC4-201ENST00000344722 TJP3O95049 919 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 TMOD1P28289 359 aa19.38■□□□□ 0.69
SMC4-201ENST00000344722 TTLL12Q14166 644 aaPredicted RBP19.38■□□□□ 0.69
SMC4-201ENST00000344722 DARS2Q6PI48 645 aaKnown RBP19.38■□□□□ 0.69
SMC4-201ENST00000344722 MRPL11Q9Y3B7 192 aaKnown RBP19.38■□□□□ 0.69
SMC4-201ENST00000344722 PITPNM2Q9BZ72 1349 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 KCNA3P22001 575 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 OCA2Q04671 838 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 KCNH2Q12809 1159 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 RSRC2Q7L4I2 434 aaKnown RBP19.37■□□□□ 0.69
SMC4-201ENST00000344722 DNAJC24Q6P3W2 148 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 CCDC137Q6PK04 289 aaKnown RBP19.37■□□□□ 0.69
SMC4-201ENST00000344722 LONP2Q86WA8 852 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 CFAP36Q96G28 342 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 TMOD4Q9NZQ9 345 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 TRIM10Q9UDY6 481 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 SSU72P8A0A1W2PR75 194 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 CFAP69A5D8W1 941 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 SAT1P21673 171 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 GUF1Q8N442 669 aaKnown RBP19.37■□□□□ 0.69
SMC4-201ENST00000344722 TRIM15Q9C019 465 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 PARVGQ9HBI0 331 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 SENP1Q9P0U3 644 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 SEPT10Q9P0V9 454 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 ORC6Q9Y5N6 252 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 FOXP2O15409 715 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 GYPCP04921 128 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 STAT2P52630 851 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 ATP2C1P98194 919 aaPredicted RBP19.37■□□□□ 0.69
SMC4-201ENST00000344722 MS4A14Q96JA4 679 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 SMYD3Q9H7B4 428 aa19.37■□□□□ 0.69
SMC4-201ENST00000344722 AP5Z1O43299 807 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 SESTD1Q86VW0 696 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 NACC1Q96RE7 527 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 TTLL3Q9Y4R7 772 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 A6NJR5 290 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 LRRIQ3A6PVS8 624 aaPredicted RBP19.36■□□□□ 0.69
SMC4-201ENST00000344722 DPYDQ12882 1025 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 RAD54LQ92698 747 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 PAIP2BQ9ULR5 123 aaKnown RBP19.36■□□□□ 0.69
SMC4-201ENST00000344722 CCDC22O60826 627 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 DYNLL1P63167 89 aaKnown RBP19.36■□□□□ 0.69
SMC4-201ENST00000344722 DYNLT1P63172 113 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 ORC2Q13416 577 aaPredicted RBP19.36■□□□□ 0.69
SMC4-201ENST00000344722 STAT4Q14765 748 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 USPL1Q5W0Q7 1092 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 SGMS1Q86VZ5 419 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 HDAC11Q96DB2 347 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 WNT8AQ9H1J5 351 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 hCG_2014768A0A024R1R8 64 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 PRAMEF22A3QJZ6 481 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 PYGBP11216 843 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 PCYT1AP49585 367 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 ZNF211Q13398 564 aaPredicted RBP19.36■□□□□ 0.69
SMC4-201ENST00000344722 DEPDC1BQ8WUY9 529 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 ISCUQ9H1K1 167 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 GGT7Q9UJ14 662 aa19.36■□□□□ 0.69
SMC4-201ENST00000344722 MYCBPAPQ8TBZ2 947 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 AMNQ9BXJ7 453 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 MRPL40Q9NQ50 206 aaKnown RBP19.35■□□□□ 0.69
SMC4-201ENST00000344722 PNMA2Q9UL42 364 aa19.35■□□□□ 0.69
SMC4-201ENST00000344722 HSPA8P11142 646 aaKnown RBP19.35■□□□□ 0.69
SMC4-201ENST00000344722 KPNA2P52292 529 aaKnown RBP19.35■□□□□ 0.69
SMC4-201ENST00000344722 KIAA1755Q5JYT7 1200 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms