RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CMTM5Q96DZ9 223 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 OLA1Q9NTK5 396 aaKnown RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 SENP1Q9P0U3 644 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 UBA2Q9UBT2 640 aaPredicted RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 SYNMO15061 1565 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 BUB1O43683 1085 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 ECM2O94769 699 aaPredicted RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 BCAP31P51572 246 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 MAPRE2Q15555 327 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 CALCRLQ16602 461 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 ZNF530Q6P9A1 599 aaPredicted RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 C16orf89Q6UX73 402 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 ABHD8Q96I13 439 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 DPH5Q9H2P9 285 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 GGNBP2Q9H3C7 697 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 ANKRD36A6QL64 1941 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 NCKAP5O14513 1909 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 PDE9AO76083 593 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 DDHD2O94830 711 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 PTGS2P35354 604 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 TTBK2Q6IQ55 1244 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 FHDC1Q9C0D6 1143 aaPredicted RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 DHX36Q9H2U1 1008 aaKnown RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 FAM153AQ9UHL3 310 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 CEP290O15078 2479 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 RGS12O14924 1447 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 KIF13BQ9NQT8 1826 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 CDC40O60508 579 aaKnown RBP eCLIP6.58□□□□□ -1.36
VCAN-203ENST00000343200 MSR1P21757 451 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 MMRN1Q13201 1228 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SF3B3Q15393 1217 aaKnown RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 TCP11X2Q5H9J9 407 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SPATA1Q5VX52 437 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 TRPM8Q7Z2W7 1104 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 DZIP3Q86Y13 1208 aaKnown RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 SLC26A7Q8TE54 656 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 PSD3Q9NYI0 1048 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 NRBP1Q9UHY1 535 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SH3GLB1Q9Y371 365 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 MEIS1O00470 390 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 GAS7O60861 476 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 PLTPP55058 493 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SPOPLQ6IQ16 392 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 TTC33Q6PID6 262 aaPredicted RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 LVRNQ6Q4G3 990 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SLC10A4Q96EP9 437 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SPRTNQ9H040 489 aaPredicted RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 PAG1Q9NWQ8 432 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 TAB2Q9NYJ8 693 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 POLKQ9UBT6 870 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 NOTCH3Q9UM47 2321 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 POLR3AO14802 1390 aaPredicted RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 SOS2Q07890 1332 aaPredicted RBP6.58□□□□□ -1.36
VCAN-203ENST00000343200 MROH2BQ7Z745 1585 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 RGS5O15539 181 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 MARK3P27448 753 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SLCO1A2P46721 670 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SLC12A1Q13621 1099 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SPANXN2Q5MJ10 180 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 CYP4F22Q6NT55 531 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 SKAP1Q86WV1 359 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 LRRC2Q9BYS8 371 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 TIMMDC1Q9NPL8 285 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 ZNF212Q9UDV6 495 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 ADAM30Q9UKF2 790 aa6.58□□□□□ -1.36
VCAN-203ENST00000343200 TGFBR2P37173 567 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 KMT5BQ4FZB7 885 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 TAF1BQ53T94 588 aaPredicted RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 RNPEPQ9H4A4 650 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 EML4Q9HC35 981 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 TMEM63CQ9P1W3 806 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 MAP3K5Q99683 1374 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 AHCYL1O43865 530 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 RPS6KB1P23443 525 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 AARS2Q5JTZ9 985 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 C11orf88Q6PI97 169 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 CAPN12Q6ZSI9 719 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 SPDYE1Q8NFV5 336 aaPredicted RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.57□□□□□ -1.36
VCAN-203ENST00000343200 CEP95Q96GE4 821 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 USP28Q96RU2 1077 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 CEP44Q9C0F1 390 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 FKBP14Q9NWM8 211 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 HSPA4LO95757 839 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 PMLP29590 882 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 EFR3AQ14156 821 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 TOGARAM2Q6ZUX3 1019 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 FAM178BQ8IXR5 827 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 MRPL1Q9BYD6 325 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 EDEM3Q9BZQ6 932 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 H7C1D1 291 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 CLPTM1O96005 669 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 RASSF7Q02833 373 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 YWHAHQ04917 246 aaPredicted RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 HADHQ16836 314 aaKnown RBP6.57□□□□□ -1.36
VCAN-203ENST00000343200 KLHL17Q6TDP4 642 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 PDIK1LQ8N165 341 aa6.57□□□□□ -1.36
VCAN-203ENST00000343200 KIFC1Q9BW19 673 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms