RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CCDC42Q96M95 316 aa17■□□□□ 0.31
MBD1-203ENST00000339998 ELP3Q9H9T3 547 aa17■□□□□ 0.31
MBD1-203ENST00000339998 TMOD4Q9NZQ9 345 aa17■□□□□ 0.31
MBD1-203ENST00000339998 ARMCX3Q9UH62 379 aaPredicted RBP17■□□□□ 0.31
MBD1-203ENST00000339998 SBF1O95248 1867 aa17■□□□□ 0.31
MBD1-203ENST00000339998 PHIPQ8WWQ0 1821 aa17■□□□□ 0.31
MBD1-203ENST00000339998 SPDYE4A6NLX3 237 aa17■□□□□ 0.31
MBD1-203ENST00000339998 P4HBP07237 508 aaKnown RBP17■□□□□ 0.31
MBD1-203ENST00000339998 RARRES1P49788 294 aa17■□□□□ 0.31
MBD1-203ENST00000339998 FBXO38Q6PIJ6 1188 aa17■□□□□ 0.31
MBD1-203ENST00000339998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17■□□□□ 0.312e-6■■■■■ 96.1
MBD1-203ENST00000339998 AJAP1Q9UKB5 411 aaPredicted RBP17■□□□□ 0.31
MBD1-203ENST00000339998 MYH10P35580 1976 aa17■□□□□ 0.31
MBD1-203ENST00000339998 KIAA1217Q5T5P2 1943 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 SRGAP2O75044 1071 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 BCRP11274 1271 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 EDRF1Q3B7T1 1238 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 TDRD12Q587J7 1177 aaKnown RBP16.99■□□□□ 0.31
MBD1-203ENST00000339998 OTUD5Q96G74 571 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 OLFML3Q9NRN5 406 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 TYW1Q9NV66 732 aaKnown RBP16.99■□□□□ 0.31
MBD1-203ENST00000339998 PDXKO00764 312 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 IRF6O14896 467 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 SLC26A4O43511 780 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 LRRN2O75325 713 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 YWHABP31946 246 aaKnown RBP16.99■□□□□ 0.31
MBD1-203ENST00000339998 QARSP47897 775 aaKnown RBP16.99■□□□□ 0.31
MBD1-203ENST00000339998 PPP2R3AQ06190 1150 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 SYT17Q9BSW7 474 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 CYP39A1Q9NYL5 469 aa16.99■□□□□ 0.31
MBD1-203ENST00000339998 KIF20AO95235 890 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 TRIM49P0CI25 452 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 TRIM49CP0CI26 452 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 FIGNQ5HY92 759 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 VSIG10LQ86VR7 867 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 DRC1Q96MC2 740 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 A0A1W2PQJ5 194 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 K7ENM7 598 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 KIF11P52732 1056 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 RAPGEF1Q13905 1077 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 SUPT20HL1Q3ZLR7 823 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 TEX35Q5T0J7 233 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 C9orf131Q5VYM1 1079 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 PDXDC1Q6P996 788 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 GADL1Q6ZQY3 521 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 ZC3H3Q8IXZ2 948 aaKnown RBP16.98■□□□□ 0.31
MBD1-203ENST00000339998 FAM133AQ8N9E0 248 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 JAKMIP2Q96AA8 810 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 DEF6Q9H4E7 631 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 MLXIPQ9HAP2 919 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 BTBD7Q9P203 1132 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 CALUO43852 315 aaPredicted RBP16.98■□□□□ 0.31
MBD1-203ENST00000339998 GHRHRQ02643 423 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 HGSNATQ68CP4 663 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 EEPD1Q7L9B9 569 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 ZNF526Q8TF50 670 aaPredicted RBP16.98■□□□□ 0.31
MBD1-203ENST00000339998 PAGR1Q9BTK6 254 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 TEX13BQ9BXU2 312 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 TCEAL9Q9UHQ7 104 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 ADAMTS5Q9UNA0 930 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 USP20Q9Y2K6 914 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 STK24Q9Y6E0 443 aa16.98■□□□□ 0.31
MBD1-203ENST00000339998 AKR1B10O60218 316 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 TADA3O75528 432 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 XRCC5P13010 732 aaKnown RBP16.97■□□□□ 0.31
MBD1-203ENST00000339998 SP2Q02086 613 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 XKR9Q5GH70 373 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 SULF1Q8IWU6 871 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 SLC35C1Q96A29 364 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 GINM1Q9NU53 330 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 SALL4Q9UJQ4 1053 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 C19orf81C9J6K1 198 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 RBAK-RBAKDNI3L0D1 243 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 ZNF862O60290 1169 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 CYLC1P35663 651 aaPredicted RBP16.97■□□□□ 0.31
MBD1-203ENST00000339998 ZNF131P52739 623 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 MARSP56192 900 aaKnown RBP16.97■□□□□ 0.31
MBD1-203ENST00000339998 BMT2Q1RMZ1 405 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 ANO5Q75V66 913 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 SYCP3Q8IZU3 236 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 DCPSQ96C86 337 aaKnown RBP16.97■□□□□ 0.31
MBD1-203ENST00000339998 C12orf42Q96LP6 360 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 FHOD1Q9Y613 1164 aa16.97■□□□□ 0.31
MBD1-203ENST00000339998 SLC16A4O15374 487 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 TUBB4AP04350 444 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 ATP1A1P05023 1023 aaKnown RBP16.96■□□□□ 0.31
MBD1-203ENST00000339998 GAP43P17677 238 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 PEX3P56589 373 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 TTLL12Q14166 644 aaPredicted RBP16.96■□□□□ 0.31
MBD1-203ENST00000339998 ELMO3Q96BJ8 720 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 CCDC43Q96MW1 224 aaKnown RBP16.96■□□□□ 0.31
MBD1-203ENST00000339998 GABBR1Q9UBS5 961 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 CTAGE9A4FU28 777 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 FAM102BQ5T8I3 360 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 SWSAP1Q6NVH7 229 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 PPP4R3CPQ6ZMV5 832 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 UBXN4Q92575 508 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 FAM84AQ96KN4 292 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 AGPAT3Q9NRZ7 376 aa16.96■□□□□ 0.31
MBD1-203ENST00000339998 EIF3CLB5ME19 914 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms