RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 LIMA1Q9UHB6 759 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 DENND2AQ9ULE3 1009 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 GDAQ9Y2T3 454 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 FAM237AA0A1B0GTK4 181 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 PGM3O95394 542 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 TFPTP0C1Z6 253 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 MAP7Q14244 749 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 DSTYKQ6XUX3 929 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 HS2ST1Q7LGA3 356 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 TMC3Q7Z5M5 1100 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 ECHDC2Q86YB7 292 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 ERMNQ8TAM6 284 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 EPS8L3Q8TE67 593 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 HPS3Q969F9 1004 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 LRRC45Q96CN5 670 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 MAELQ96JY0 434 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 TBC1D10AQ9BXI6 508 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 NDEL1Q9GZM8 345 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 PSTPIP2Q9H939 334 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 SNRKQ9NRH2 765 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 DBR1Q9UK59 544 aaKnown RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 FBXO9Q9UK97 447 aaPredicted RBP10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 ZBTB21Q9ULJ3 1066 aa10.44□□□□□ -0.74
PTCHD4-201ENST00000339488 ALKQ9UM73 1620 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 A0A0G2JS52 829 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 PDE5AO76074 875 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 GH1P01241 217 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 TRIM29Q14134 588 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 TRIM14Q14142 442 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 KLHL35Q6PF15 583 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 LRRC74BQ6ZQY2 392 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 DNAAF5Q86Y56 855 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 C2CD5Q86YS7 1000 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 THEMISQ8N1K5 641 aaPredicted RBP10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 CENPKQ9BS16 269 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 MYL10Q9BUA6 226 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 ISCUQ9H1K1 167 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 RXFP1Q9HBX9 757 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 NLRC4Q9NPP4 1024 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 DNAJC17Q9NVM6 304 aaKnown RBP10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 FBXO2Q9UK22 296 aaPredicted RBP10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 PCDHB6Q9Y5E3 794 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 WDR17Q8IZU2 1322 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 FAM196BA6NMK8 535 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 STK10O94804 968 aaKnown RBP10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 CDK4P11802 303 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 VPS41P49754 854 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 PMS1P54277 932 aaKnown RBP10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 TBL3Q12788 808 aaKnown RBP10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 PPP2R5CQ13362 524 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 CGB2Q6NT52 195 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 PRPF31Q8WWY3 499 aaKnown RBP10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 ARHGEF2Q92974 986 aaKnown RBP10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 ZNF274Q96GC6 653 aaPredicted RBP10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 TRIM51Q9BSJ1 452 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 CIDEBQ9UHD4 219 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 CAPN11Q9UMQ6 739 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 KCNJ14Q9UNX9 436 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 TMED5Q9Y3A6 229 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 NCKAP5LQ9HCH0 1330 aa10.43□□□□□ -0.74
PTCHD4-201ENST00000339488 METP08581 1390 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 ADAMTS13Q76LX8 1427 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 RNASEH1O60930 286 aaKnown RBP10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 PALMO75781 387 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 EIF4A3P38919 411 aaKnown RBP10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 SLC1A4P43007 532 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 MMP13P45452 471 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 EMP3P54852 163 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 CD300CQ08708 224 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 LRP8Q14114 963 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 CMPK2Q5EBM0 449 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 FAAH2Q6GMR7 532 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 PACS1Q6VY07 963 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 MARK2Q7KZI7 788 aaKnown RBP10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 MYOCDQ8IZQ8 938 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 ENDOVQ8N8Q3 282 aaKnown RBP10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 SLC43A3Q8NBI5 491 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 RIN3Q8TB24 985 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 OXER1Q8TDS5 423 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 PAGE5Q96GU1 130 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 SNX27Q96L92 541 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 STK33Q9BYT3 514 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 UBA5Q9GZZ9 404 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 AMACRQ9UHK6 382 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 BTBD18B2RXH4 712 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 PRC1O43663 620 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 TBX10O75333 385 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 ITGA4P13612 1032 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 CCNB1P14635 433 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 TOB1P50616 345 aaPredicted RBP10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 KIF11P52732 1056 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 BTKQ06187 659 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 TNIP1Q15025 636 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 ACAP1Q15027 740 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 ZCWPW2Q504Y3 356 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 ZNF394Q53GI3 561 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 EPHA10Q5JZY3 1008 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 POTEEQ6S8J3 1075 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms