RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 VAV3Q9UKW4 847 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 MYH9P35579 1960 aaKnown RBP12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 TANC1Q9C0D5 1861 aa12.71□□□□□ -0.38
SLC28A1-202ENST00000338602 DDX11L8A8MPP1 907 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 KIF28PB7ZC32 967 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 K7ELQ4 463 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 ZNF862O60290 1169 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 ATP2A2P16615 1042 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 TBC1D8BQ0IIM8 1120 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 ZNF174Q15697 407 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 RILPL1Q5EBL4 403 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 ODR4Q5SWX8 454 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 FAM43BQ6ZT52 329 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 OTUD6AQ7L8S5 288 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 HSCBQ8IWL3 235 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 NEK9Q8TD19 979 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 INTS4Q96HW7 963 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 MAP7D2Q96T17 732 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 ZSWIM4Q9H7M6 989 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 CXXC1Q9P0U4 656 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 TRPV2Q9Y5S1 764 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 CDY2AQ9Y6F7 541 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 SQORQ9Y6N5 450 aa12.7□□□□□ -0.38
SLC28A1-202ENST00000338602 TMEM265A0A087WTH1 108 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 EML1O00423 815 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 CHRNA1P02708 482 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 OR52Z1P0C646 297 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 DNM2P50570 870 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 GPNMBQ14956 572 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 UGCGQ16739 394 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 PLEKHG4Q58EX7 1191 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 FAM109BQ6ICB4 259 aaPredicted RBP12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 BANK1Q8NDB2 785 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 DBF4BQ8NFT6 615 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 ERMNQ8TAM6 284 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 SNX21Q969T3 373 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 VWCEQ96DN2 955 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 MTMR9Q96QG7 549 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 NIFKQ9BYG3 293 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 IFIH1Q9BYX4 1025 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 CELF4Q9BZC1 486 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 RAB34Q9BZG1 259 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 PPME1Q9Y570 386 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 ZBTB42B2RXF5 422 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 LAD1O00515 517 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 C22orf31O95567 290 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 AMHP03971 560 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 HSP90AA1P07900 732 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 CDC42EP1Q00587 391 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 MGAT3Q09327 533 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 MBTPS1Q14703 1052 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 MTERF2Q49AM1 385 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 EFCAB12Q6NXP0 572 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 TPH2Q8IWU9 490 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 C4orf19Q8IY42 314 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 TIFAQ96CG3 184 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 ZBTB10Q96DT7 871 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 CCDC43Q96MW1 224 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 EIF2AK1Q9BQI3 630 aaKnown RBP12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 LXNQ9BS40 222 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 ZBED2Q9BTP6 218 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 SUGCTQ9HAC7 445 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 AKT3Q9Y243 479 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 GINS2Q9Y248 185 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
SLC28A1-202ENST00000338602 SCN5AQ14524 2016 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 KDM3AQ9Y4C1 1321 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 GHRP10912 638 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 DNAJB2P25686 324 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 TECP42680 631 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 WDR5P61964 334 aaKnown RBP12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 CYP4A11Q02928 519 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 SPIRE1Q08AE8 756 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 TMEM62Q0P6H9 643 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 FBXO47Q5MNV8 452 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 TSHZ1Q6ZSZ6 1077 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 KIAA0319LQ8IZA0 1049 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 SLC7A3Q8WY07 619 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 DYDC2Q96IM9 177 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 CEP170P1Q96L14 293 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 FTHL17Q9BXU8 183 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 TMEM60Q9H2L4 133 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 RGL1Q9NZL6 768 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 PCDHA11Q9Y5I1 949 aa12.68□□□□□ -0.38
SLC28A1-202ENST00000338602 VPS37CA5D8V6 355 aaPredicted RBP12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 GRXCR1A8MXD5 290 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 WNT7AO00755 349 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 SLITRK3O94933 977 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 YWHABP31946 246 aaKnown RBP12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 RFC5P40937 340 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 CRYBB1P53674 252 aaPredicted RBP12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 PAK2Q13177 524 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 CTTNQ14247 550 aaKnown RBP12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 LPIN1Q14693 890 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 TARBP2Q15633 366 aaKnown RBP12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 HAUS3Q68CZ6 603 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 BRAPQ7Z569 592 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 HERC6Q8IVU3 1022 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms