RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SYCE3A1L190 88 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 SLC26A2P50443 739 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 XKR9Q5GH70 373 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 LHX8Q68G74 356 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 C1orf186Q6ZWK4 172 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 SPATA20Q8TB22 786 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 ATP8B4Q8TF62 1192 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 KAT2BQ92831 832 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 DNAJC19Q96DA6 116 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 NIFKQ9BYG3 293 aaKnown RBP23.95■■□□□ 1.43
TPM1-204ENST00000334895 UNC93B1Q9H1C4 597 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 RNPEPQ9H4A4 650 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 ERAP1Q9NZ08 941 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 KIAA1468Q9P260 1216 aa23.95■■□□□ 1.43
TPM1-204ENST00000334895 HOOK1Q9UJC3 728 aaKnown RBP23.95■■□□□ 1.43
TPM1-204ENST00000334895 ARHGEF35A5YM69 484 aa23.95■■□□□ 1.42
TPM1-204ENST00000334895 F2P00734 622 aa23.95■■□□□ 1.42
TPM1-204ENST00000334895 SARSP49591 514 aaKnown RBP23.95■■□□□ 1.42
TPM1-204ENST00000334895 AMPD3Q01432 767 aa23.95■■□□□ 1.42
TPM1-204ENST00000334895 CNNM4Q6P4Q7 775 aa23.95■■□□□ 1.42
TPM1-204ENST00000334895 OTUD6AQ7L8S5 288 aa23.95■■□□□ 1.42
TPM1-204ENST00000334895 KLHDC9Q8NEP7 349 aa23.95■■□□□ 1.42
TPM1-204ENST00000334895 DDX12PQ92771 950 aa23.95■■□□□ 1.42
TPM1-204ENST00000334895 CEP89Q96ST8 783 aa23.95■■□□□ 1.42
TPM1-204ENST00000334895 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.95■■□□□ 1.42
TPM1-204ENST00000334895 TUBE1Q9UJT0 475 aa23.95■■□□□ 1.42
TPM1-204ENST00000334895 H3BRB1 525 aa23.94■■□□□ 1.42
TPM1-204ENST00000334895 KLRC4O43908 158 aa23.94■■□□□ 1.42
TPM1-204ENST00000334895 MYL1P05976 194 aa23.94■■□□□ 1.42
TPM1-204ENST00000334895 TARBP2Q15633 366 aaKnown RBP23.94■■□□□ 1.42
TPM1-204ENST00000334895 NT5DC1Q5TFE4 455 aa23.94■■□□□ 1.42
TPM1-204ENST00000334895 PADI6Q6TGC4 694 aa23.94■■□□□ 1.42
TPM1-204ENST00000334895 DYMQ7RTS9 669 aa23.94■■□□□ 1.42
TPM1-204ENST00000334895 BBXQ8WY36 941 aaPredicted RBP23.94■■□□□ 1.42
TPM1-204ENST00000334895 FAM167AQ96KS9 214 aa23.94■■□□□ 1.42
TPM1-204ENST00000334895 CEP170P1Q96L14 293 aa23.94■■□□□ 1.42
TPM1-204ENST00000334895 TUT1Q9H6E5 874 aaKnown RBP23.94■■□□□ 1.42
TPM1-204ENST00000334895 CYP26B1Q9NR63 512 aa23.94■■□□□ 1.42
TPM1-204ENST00000334895 ZBTB42B2RXF5 422 aa23.93■■□□□ 1.42
TPM1-204ENST00000334895 MSCO60682 206 aa23.93■■□□□ 1.42
TPM1-204ENST00000334895 MYL3P08590 195 aa23.93■■□□□ 1.42
TPM1-204ENST00000334895 PURAQ00577 322 aaKnown RBP23.93■■□□□ 1.42
TPM1-204ENST00000334895 RAD51AP2Q09MP3 1159 aa23.93■■□□□ 1.42
TPM1-204ENST00000334895 BRDTQ58F21 947 aaPredicted RBP23.93■■□□□ 1.42
TPM1-204ENST00000334895 GNASQ5JWF2 1037 aa23.93■■□□□ 1.42
TPM1-204ENST00000334895 CCSAPQ6IQ19 270 aaPredicted RBP23.93■■□□□ 1.42
TPM1-204ENST00000334895 SPC25Q9HBM1 224 aa23.93■■□□□ 1.42
TPM1-204ENST00000334895 NRBP2Q9NSY0 501 aa23.93■■□□□ 1.42
TPM1-204ENST00000334895 CST5P28325 142 aaPredicted RBP23.92■■□□□ 1.42
TPM1-204ENST00000334895 CACNB1Q02641 598 aaPredicted RBP23.92■■□□□ 1.42
TPM1-204ENST00000334895 GIT2Q14161 759 aa23.92■■□□□ 1.42
TPM1-204ENST00000334895 MTERF2Q49AM1 385 aa23.92■■□□□ 1.42
TPM1-204ENST00000334895 REEP2Q9BRK0 252 aa23.92■■□□□ 1.42
TPM1-204ENST00000334895 LRRC27Q9C0I9 530 aa23.92■■□□□ 1.42
TPM1-204ENST00000334895 ZNF215Q9UL58 517 aaPredicted RBP23.92■■□□□ 1.42
TPM1-204ENST00000334895 LETM1O95202 739 aaPredicted RBP23.92■■□□□ 1.42
TPM1-204ENST00000334895 RPN1P04843 607 aaKnown RBP23.92■■□□□ 1.42
TPM1-204ENST00000334895 ASIC1P78348 528 aa23.92■■□□□ 1.42
TPM1-204ENST00000334895 SMARCE1Q969G3 411 aa23.92■■□□□ 1.42
TPM1-204ENST00000334895 PAK6Q9NQU5 681 aaPredicted RBP23.92■■□□□ 1.42
TPM1-204ENST00000334895 TRPC6Q9Y210 931 aa23.92■■□□□ 1.42
TPM1-204ENST00000334895 HAS3O00219 553 aa23.91■■□□□ 1.42
TPM1-204ENST00000334895 USO1O60763 962 aaKnown RBP23.91■■□□□ 1.42
TPM1-204ENST00000334895 CCL5P13501 91 aa23.91■■□□□ 1.42
TPM1-204ENST00000334895 CCDC43Q96MW1 224 aaKnown RBP23.91■■□□□ 1.42
TPM1-204ENST00000334895 FUCA2Q9BTY2 467 aa23.91■■□□□ 1.42
TPM1-204ENST00000334895 POLD4Q9HCU8 107 aa23.91■■□□□ 1.42
TPM1-204ENST00000334895 PDLIM7Q9NR12 457 aa23.91■■□□□ 1.42
TPM1-204ENST00000334895 BMP2KQ9NSY1 1161 aaPredicted RBP23.91■■□□□ 1.42
TPM1-204ENST00000334895 KCND2Q9NZV8 630 aa23.91■■□□□ 1.42
TPM1-204ENST00000334895 MAN1B1Q9UKM7 699 aa23.91■■□□□ 1.42
TPM1-204ENST00000334895 SCN10AQ9Y5Y9 1956 aa23.9■■□□□ 1.42
TPM1-204ENST00000334895 CCDC85CA6NKD9 419 aa23.9■■□□□ 1.42
TPM1-204ENST00000334895 BIN1O00499 593 aa23.9■■□□□ 1.42
TPM1-204ENST00000334895 HBP1O60381 514 aa23.9■■□□□ 1.42
TPM1-204ENST00000334895 SMC2O95347 1197 aa23.9■■□□□ 1.42
TPM1-204ENST00000334895 GUCY2CP25092 1073 aa23.9■■□□□ 1.42
TPM1-204ENST00000334895 XPNPEP1Q9NQW7 623 aa23.9■■□□□ 1.42
TPM1-204ENST00000334895 FRMD3A2A2Y4 597 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 RSPH10B2B2RC85 870 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 CAPN15O75808 1086 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 RSPH10BP0C881 870 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 MAPK7Q13164 816 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 LRRC41Q15345 812 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 KCNA10Q16322 511 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 KMT5BQ4FZB7 885 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 CXCL17Q6UXB2 119 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 DAW1Q8N136 415 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 TRAPPC12Q8WVT3 735 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 GSDMAQ96QA5 445 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 RNF208Q9H0X6 261 aa23.89■■□□□ 1.42
TPM1-204ENST00000334895 KPNA6O60684 536 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 KRT18P05783 430 aaKnown RBP23.88■■□□□ 1.41
TPM1-204ENST00000334895 INSRRP14616 1297 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 BMP6P22004 513 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 PSEN2P49810 448 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 EHHADHQ08426 723 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 MFSD10Q14728 455 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 KIAA0753Q2KHM9 967 aa23.88■■□□□ 1.41
TPM1-204ENST00000334895 ISM2Q6H9L7 571 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms