RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 TSKSQ9UJT2 592 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 VAV3Q9UKW4 847 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 PSME4Q14997 1843 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 ATRNL1Q5VV63 1379 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 A0A087X0T9 212 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 PALMO75781 387 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 FAM228BP0C875 321 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 KLRC1P26715 233 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 HOXA13P31271 388 aaPredicted RBP17.62■□□□□ 0.41
USHBP1-202ENST00000324554 DNA2P51530 1060 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 KLHL30Q0D2K2 578 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 NAB2Q15742 525 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 ZYXQ15942 572 aaKnown RBP17.62■□□□□ 0.41
USHBP1-202ENST00000324554 SKIDA1Q1XH10 827 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 FRMD5Q7Z6J6 570 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 CYP2W1Q8TAV3 490 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 FAM151AQ8WW52 585 aa17.62■□□□□ 0.41
USHBP1-202ENST00000324554 FTCDO95954 541 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 GLI1P08151 1106 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 MYBP10242 640 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 BMP3P12645 472 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 CYP4A11Q02928 519 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 ASIC2Q16515 512 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 TBC1D10BQ4KMP7 808 aaPredicted RBP17.61■□□□□ 0.41
USHBP1-202ENST00000324554 DPY19L2P1Q6NXN4 242 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
USHBP1-202ENST00000324554 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.61■□□□□ 0.41
USHBP1-202ENST00000324554 ADAMTS1Q9UHI8 967 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 CD2APQ9Y5K6 639 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 ZSCAN5CA6NGD5 496 aaPredicted RBP17.61■□□□□ 0.41
USHBP1-202ENST00000324554 CFAP221Q4G0U5 840 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 EMBQ6PCB8 327 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 PACSIN1Q9BY11 444 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 ARMCX3Q9UH62 379 aaPredicted RBP17.61■□□□□ 0.41
USHBP1-202ENST00000324554 PACSIN2Q9UNF0 486 aaPredicted RBP17.61■□□□□ 0.41
USHBP1-202ENST00000324554 STK24Q9Y6E0 443 aa17.61■□□□□ 0.41
USHBP1-202ENST00000324554 RSPH10B2B2RC85 870 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 PDXKO00764 312 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 RSPH10BP0C881 870 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 ACTN1P12814 892 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 TNFRSF8P28908 595 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
USHBP1-202ENST00000324554 BTNL9Q6UXG8 535 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 ACER1Q8TDN7 264 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 VPS33BQ9H267 617 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 BHMT2Q9H2M3 363 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 PCDHGC5Q9Y5F6 944 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 FER1L6Q2WGJ9 1857 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 AFPP02771 609 aaKnown RBP17.6■□□□□ 0.41
USHBP1-202ENST00000324554 SLC9A1P19634 815 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 GMPSP49915 693 aaPredicted RBP17.6■□□□□ 0.41
USHBP1-202ENST00000324554 IRAK1P51617 712 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 KIAA0753Q2KHM9 967 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 CAVIN3Q969G5 261 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 ARL8AQ96BM9 186 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 RUSC1Q9BVN2 902 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 PLCB1Q9NQ66 1216 aa17.6■□□□□ 0.41
USHBP1-202ENST00000324554 BRCA1P38398 1863 aaKnown RBP17.6■□□□□ 0.41
USHBP1-202ENST00000324554 ESYT3A0FGR9 886 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 CALUO43852 315 aaPredicted RBP17.59■□□□□ 0.41
USHBP1-202ENST00000324554 AKAP3O75969 853 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 CARSP49589 748 aaKnown RBP17.59■□□□□ 0.41
USHBP1-202ENST00000324554 BMT2Q1RMZ1 405 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 TTMPQ5BVD1 217 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 KIAA1755Q5JYT7 1200 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 MICALL2Q8IY33 904 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 EIF2AK1Q9BQI3 630 aaKnown RBP17.59■□□□□ 0.41
USHBP1-202ENST00000324554 POLR3CQ9BUI4 534 aaPredicted RBP17.59■□□□□ 0.41
USHBP1-202ENST00000324554 BCAS3Q9H6U6 928 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 RNF14Q9UBS8 474 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 ASTN1O14525 1302 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 EML1O00423 815 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 CYP3A4P08684 503 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 FAM153BP0C7A2 387 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 XRCC5P13010 732 aaKnown RBP17.59■□□□□ 0.41
USHBP1-202ENST00000324554 UCHL3P15374 230 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 PTK2Q05397 1052 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 FAM153CQ494X1 144 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 IRF2BP2Q7Z5L9 587 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 FAM153AQ9UHL3 310 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 PRR12Q9ULL5 1215 aa17.59■□□□□ 0.41
USHBP1-202ENST00000324554 IGLV3-22A0A075B6J6 115 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 GOLGA8KD6RF30 607 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 PIK3CDO00329 1044 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 PON1P27169 355 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 ZNF76P36508 570 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 PPFIA1Q13136 1202 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 RASA3Q14644 834 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 TNIP1Q15025 636 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 GLE1Q53GS7 698 aaKnown RBP17.58■□□□□ 0.41
USHBP1-202ENST00000324554 MEI1Q5TIA1 1274 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 BBXQ8WY36 941 aaPredicted RBP17.58■□□□□ 0.41
USHBP1-202ENST00000324554 GLIS2Q9BZE0 524 aaPredicted RBP17.58■□□□□ 0.41
USHBP1-202ENST00000324554 POLD4Q9HCU8 107 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 GDF3Q9NR23 364 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 TYW1Q9NV66 732 aaKnown RBP17.58■□□□□ 0.41
USHBP1-202ENST00000324554 RGL1Q9NZL6 768 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 NFU1Q9UMS0 254 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 RABGAP1Q9Y3P9 1069 aa17.58■□□□□ 0.41
USHBP1-202ENST00000324554 EYA4O95677 639 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms