RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SARSP49591 514 aaKnown RBP16.2■□□□□ 0.18
RPP40-201ENST00000319533 RTN1Q16799 776 aa16.2■□□□□ 0.18
RPP40-201ENST00000319533 HERC4Q5GLZ8 1057 aaPredicted RBP16.2■□□□□ 0.18
RPP40-201ENST00000319533 DHX32Q7L7V1 743 aaKnown RBP16.2■□□□□ 0.18
RPP40-201ENST00000319533 KIAA0319LQ8IZA0 1049 aa16.2■□□□□ 0.18
RPP40-201ENST00000319533 EFHBQ8N7U6 833 aa16.2■□□□□ 0.18
RPP40-201ENST00000319533 ATP8B4Q8TF62 1192 aa16.2■□□□□ 0.18
RPP40-201ENST00000319533 PPP2R3CQ969Q6 453 aa16.2■□□□□ 0.18
RPP40-201ENST00000319533 ERVK-5Q9HDB9 667 aa16.2■□□□□ 0.18
RPP40-201ENST00000319533 IGLV3-22A0A075B6J6 115 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 ZBTB42B2RXF5 422 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 CYP3A4P08684 503 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 COASYQ13057 564 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 CLUL1Q15846 466 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 CSPP1Q1MSJ5 1256 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 ZNF484Q5JVG2 852 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 FAM160B1Q5W0V3 765 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 ADGRD2Q7Z7M1 963 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 SKAP1Q86WV1 359 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 POF1BQ8WVV4 589 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 IGFLR1Q9H665 355 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 RGS18Q9NS28 235 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 TMEM260Q9NX78 707 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 CLEC1BQ9P126 229 aa16.19■□□□□ 0.18
RPP40-201ENST00000319533 TRIOO75962 3097 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 FAM86B1E9PN63 330 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 MGEA5O60502 916 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 FAM86B2P0C5J1 330 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 ATP4AP20648 1035 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 CDC27P30260 824 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 GATMP50440 423 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 UBE3AQ05086 875 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 TMEM266Q2M3C6 531 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 PAN2Q504Q3 1202 aaKnown RBP16.18■□□□□ 0.18
RPP40-201ENST00000319533 ODR4Q5SWX8 454 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 CCDC60Q8IWA6 550 aaPredicted RBP16.18■□□□□ 0.18
RPP40-201ENST00000319533 SMRP1Q8NCR6 262 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 TMEM40Q8WWA1 233 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 CDHR5Q9HBB8 845 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 C1orf112Q9NSG2 853 aa16.18■□□□□ 0.18
RPP40-201ENST00000319533 NOC2LQ9Y3T9 749 aaKnown RBP16.18■□□□□ 0.18
RPP40-201ENST00000319533 ZNF318Q5VUA4 2279 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 ESYT2A0FGR8 921 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 C9IYK1 514 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 RPS6KA5O75582 802 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 NDUFV1P49821 464 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 FAM189BP81408 668 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 NFX1Q12986 1120 aaKnown RBP16.17■□□□□ 0.18
RPP40-201ENST00000319533 PFKFB3Q16875 520 aaPredicted RBP16.17■□□□□ 0.18
RPP40-201ENST00000319533 MCTP2Q6DN12 878 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 MIS18BP1Q6P0N0 1132 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 PDXDC2PQ6P474 469 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 SLC24A5Q71RS6 500 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 PLA2G4DQ86XP0 818 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 RNF135Q8IUD6 432 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 RASEFQ8IZ41 740 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 ZNF302Q9NR11 478 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 LRFN2Q9ULH4 789 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 ST3GAL5Q9UNP4 418 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 PCDHB7Q9Y5E2 793 aa16.17■□□□□ 0.18
RPP40-201ENST00000319533 MAFBQ9Y5Q3 323 aaPredicted RBP16.17■□□□□ 0.18
RPP40-201ENST00000319533 FNDC1Q4ZHG4 1894 aaPredicted RBP16.16■□□□□ 0.18
RPP40-201ENST00000319533 GOLGA8AA7E2F4 631 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 GOLGA8BA8MQT2 603 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 IPO5O00410 1097 aaKnown RBP16.16■□□□□ 0.18
RPP40-201ENST00000319533 BACH1O14867 736 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 GPR182O15218 404 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 C22orf31O95567 290 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 GLP2RO95838 553 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 ZNF76P36508 570 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 CRYBB1P53674 252 aaPredicted RBP16.16■□□□□ 0.18
RPP40-201ENST00000319533 CBX2Q14781 532 aaPredicted RBP16.16■□□□□ 0.18
RPP40-201ENST00000319533 ADCK5Q3MIX3 580 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 ZNF746Q6NUN9 644 aaPredicted RBP16.16■□□□□ 0.18
RPP40-201ENST00000319533 SWSAP1Q6NVH7 229 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 HFE2Q6ZVN8 426 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 BBXQ8WY36 941 aaPredicted RBP16.16■□□□□ 0.18
RPP40-201ENST00000319533 UIMC1Q96RL1 719 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 ADAM2Q99965 735 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 ZMYND12Q9H0C1 365 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 TBC1D22BQ9NU19 505 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 MUTYHQ9UIF7 546 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 PLXNA4Q9HCM2 1894 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 TECTAO75443 2155 aa16.16■□□□□ 0.18
RPP40-201ENST00000319533 KLF18A0A0U1RQI7 1052 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 LOC730098B7Z3J9 87 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 DDX39AO00148 427 aaKnown RBP16.15■□□□□ 0.18
RPP40-201ENST00000319533 GPR32O75388 356 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 CSPG5O95196 566 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 NRIP1P48552 1158 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 KRT32Q14532 448 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 DSC3Q14574 896 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 JAKMIP3Q5VZ66 844 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 BMP8AQ7Z5Y6 402 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 EDAQ92838 391 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 ELAC1Q9H777 363 aaKnown RBP16.15■□□□□ 0.18
RPP40-201ENST00000319533 AAASQ9NRG9 546 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 PPP4R2Q9NY27 417 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms