RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 SLC17A8Q8NDX2 589 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 SYTL5Q8TDW5 730 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 MMS19Q96T76 1030 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 RIT2Q99578 217 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 PLCD4Q9BRC7 762 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 RUSC1Q9BVN2 902 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 LIMA1Q9UHB6 759 aaKnown RBP10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 ERICH4A6NGS2 130 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 TXNP10599 105 aaKnown RBP10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 TNNC1P63316 161 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 SNAPC2Q13487 334 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 NCAPHQ15003 741 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 C8orf74Q6P047 294 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 DCUN1D2Q6PH85 259 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 SESTD1Q86VW0 696 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 TEX2Q8IWB9 1127 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 NLRP7Q8WX94 980 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 TMEM143Q96AN5 459 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 FAM213AQ9BRX8 229 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 POLR3FQ9H1D9 316 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 CCL15-CCL14A0A0B4J2E2 113 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 M0QZ92 97 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 KCNK3O14649 394 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 NR1I3Q14994 352 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 CCL15Q16663 113 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 JPH2Q9BR39 696 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 MSTO1Q9BUK6 570 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 AP5M1Q9H0R1 490 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 TNNC2P02585 160 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 PGK2P07205 417 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 CXCR5P32302 372 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 STAT5BP51692 787 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 LLGL1Q15334 1064 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 IL17AQ16552 155 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 KCNK18Q7Z418 384 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 ADAT2Q7Z6V5 191 aaKnown RBP10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 CHP1Q99653 195 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 SEL1LQ9UBV2 794 aa10.12□□□□□ -0.79
TMEM39A-201ENST00000319172 ZNF233A6NK53 670 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 PPP1R11O60927 126 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 CELF2O95319 508 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 FERP16591 822 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 PDE6CP51160 858 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 CCZ1BP86790 482 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 CCZ1P86791 482 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 TTLL4Q14679 1199 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 LIN9Q5TKA1 542 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 LEKR1Q6ZMV7 388 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 ERO1BQ86YB8 467 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 PNMA5Q96PV4 448 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 AGPAT5Q9NUQ2 364 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 NXF1Q9UBU9 619 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 VIRMAQ69YN4 1812 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 VWA5AO00534 786 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 MEIS2O14770 477 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 MOCS3O95396 460 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 PTPRAP18433 802 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 KLK7P49862 253 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 SEL1L2Q5TEA6 688 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 MOB2Q70IA6 237 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 GSTA5Q7RTV2 222 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 RHPN2Q8IUC4 686 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 ELOA2Q8IYF1 753 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 MTRQ99707 1265 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 PDCD2LQ9BRP1 358 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 IRX2Q9BZI1 471 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 GINM1Q9NU53 330 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 DNAJC12Q9UKB3 198 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 ADAMTS3O15072 1205 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 VAV2P52735 878 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 HUNKP57058 714 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 ALCAMQ13740 583 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 MUM1L1Q5H9M0 696 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 RINT1Q6NUQ1 792 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 INTS8Q75QN2 995 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 PHLDB2Q86SQ0 1253 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 MSANTD4Q8NCY6 345 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 ROBO3Q96MS0 1386 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 GPRC5CQ9NQ84 441 aa10.11□□□□□ -0.79
TMEM39A-201ENST00000319172 MARF1Q9Y4F3 1742 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 MFAP3P55082 362 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 SYT2Q8N9I0 419 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 KIFC3Q9BVG8 833 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 NUP98P52948 1817 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 NFKBIEO00221 500 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 NPM3O75607 178 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 FTCDO95954 541 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 CD58P19256 250 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 PMS1P54277 932 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 KIF22Q14807 665 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 CFAP221Q4G0U5 840 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 LMBRD2Q68DH5 695 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 MOXD1Q6UVY6 613 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 PSPC1Q8WXF1 523 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 TNFRSF25Q93038 417 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 AMFRQ9UKV5 643 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 PCDHB4Q9Y5E5 795 aa10.1□□□□□ -0.79
TMEM39A-201ENST00000319172 LAMB4A4D0S4 1761 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms