RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 HMGB1P1B2RPK0 211 aaPredicted RBP17.48■□□□□ 0.39
CRAT-201ENST00000318080 H0YGN5 161 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 SLC9A1P19634 815 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 HSPA9P38646 679 aaKnown RBP17.48■□□□□ 0.39
CRAT-201ENST00000318080 NBPF9Q3BBW0 867 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 TMEM119Q4V9L6 283 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 FAM133BQ5BKY9 247 aaKnown RBP17.48■□□□□ 0.39
CRAT-201ENST00000318080 FAM26FQ5R3K3 315 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 KRT79Q5XKE5 535 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 TLDC1Q6P9B6 456 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 MAEAQ7L5Y9 396 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 ZNF571Q7Z3V5 609 aaPredicted RBP17.48■□□□□ 0.39
CRAT-201ENST00000318080 CCDC125Q86Z20 511 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 PAGR1Q9BTK6 254 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.48■□□□□ 0.39
CRAT-201ENST00000318080 NFS1Q9Y697 457 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 MYBL1P10243 752 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 TBC1D1Q86TI0 1168 aaPredicted RBP17.48■□□□□ 0.39
CRAT-201ENST00000318080 CACNA2D3Q8IZS8 1091 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 LRRC47Q8N1G4 583 aaKnown RBP17.48■□□□□ 0.39
CRAT-201ENST00000318080 LZTS2Q9BRK4 669 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 TAF1DQ9H5J8 278 aaPredicted RBP17.48■□□□□ 0.39
CRAT-201ENST00000318080 BCAS3Q9H6U6 928 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 RIC8AQ9NPQ8 531 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 RNF14Q9UBS8 474 aa17.48■□□□□ 0.39
CRAT-201ENST00000318080 ELF3P78545 371 aaPredicted RBP17.47■□□□□ 0.39
CRAT-201ENST00000318080 EMC10Q5UCC4 262 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 TRIM59Q8IWR1 403 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 UHMK1Q8TAS1 419 aaKnown RBP17.47■□□□□ 0.39
CRAT-201ENST00000318080 CELF4Q9BZC1 486 aaKnown RBP17.47■□□□□ 0.39
CRAT-201ENST00000318080 GANQ9H2C0 597 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 DPH5Q9H2P9 285 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 NOD2Q9HC29 1040 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 ROBO3Q96MS0 1386 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 QSER1Q2KHR3 1735 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 F8W031 263 aaPredicted RBP17.47■□□□□ 0.39
CRAT-201ENST00000318080 RPS6KA1Q15418 735 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 TMEM266Q2M3C6 531 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 WHAMMQ8TF30 809 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 NSMCE1Q8WV22 266 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 SCFD1Q8WVM8 642 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 EDEM3Q9BZQ6 932 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 GPCPD1Q9NPB8 672 aa17.47■□□□□ 0.39
CRAT-201ENST00000318080 CASP5P51878 434 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 DOK7Q18PE1 504 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 UBAP2Q5T6F2 1119 aaKnown RBP17.46■□□□□ 0.39
CRAT-201ENST00000318080 ADAT2Q7Z6V5 191 aaKnown RBP17.46■□□□□ 0.39
CRAT-201ENST00000318080 TRIM6Q9C030 488 aaPredicted RBP17.46■□□□□ 0.39
CRAT-201ENST00000318080 ZHX3Q9H4I2 956 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 AJAP1Q9UKB5 411 aaPredicted RBP17.46■□□□□ 0.39
CRAT-201ENST00000318080 PCDHA2Q9Y5H9 948 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 SART1O43290 800 aaKnown RBP17.46■□□□□ 0.39
CRAT-201ENST00000318080 DAPK3O43293 454 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 RTN2O75298 545 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 ATP6V1G2O95670 118 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 ASIC2Q16515 512 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 PPP4R3AQ6IN85 833 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 IRF2BP2Q7Z5L9 587 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 SP8Q8IXZ3 490 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 PRCCQ92733 491 aaPredicted RBP17.46■□□□□ 0.39
CRAT-201ENST00000318080 SYN2Q92777 582 aaPredicted RBP17.46■□□□□ 0.39
CRAT-201ENST00000318080 ISCUQ9H1K1 167 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 AMACRQ9UHK6 382 aa17.46■□□□□ 0.39
CRAT-201ENST00000318080 ZBTB12Q9Y330 459 aaPredicted RBP17.46■□□□□ 0.39
CRAT-201ENST00000318080 PPP1R11O60927 126 aaPredicted RBP17.45■□□□□ 0.38
CRAT-201ENST00000318080 KIF4AO95239 1232 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 DPEP1P16444 411 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 COPB2P35606 906 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 KCNH2Q12809 1159 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 METTL13Q8N6R0 699 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 NEDD1Q8NHV4 660 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 KIF9Q9HAQ2 790 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 PLCB1Q9NQ66 1216 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 KCNQ5Q9NR82 932 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 KIAA1024Q9UPX6 916 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 BUB1BO60566 1050 aaPredicted RBP17.45■□□□□ 0.38
CRAT-201ENST00000318080 BTDP43251 543 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 ADCY7P51828 1080 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 TNNC1P63316 161 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 ADAM9Q13443 819 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 KRT71Q3SY84 523 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 HERC4Q5GLZ8 1057 aaPredicted RBP17.45■□□□□ 0.38
CRAT-201ENST00000318080 SPTY2D1Q68D10 685 aaPredicted RBP17.45■□□□□ 0.38
CRAT-201ENST00000318080 DPY19L2P1Q6NXN4 242 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 RBM46Q8TBY0 533 aaKnown RBP17.45■□□□□ 0.38
CRAT-201ENST00000318080 SCFD2Q8WU76 684 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 TAF4BQ92750 862 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 TACO1Q9BSH4 297 aaKnown RBP17.45■□□□□ 0.38
CRAT-201ENST00000318080 MXD3Q9BW11 206 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 RTFDC1Q9BY42 306 aaPredicted RBP17.45■□□□□ 0.38
CRAT-201ENST00000318080 AIPL1Q9NZN9 384 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 PNMA2Q9UL42 364 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 POTEB3A0JP26 581 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 ENO4A6NNW6 628 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 A6NNZ2 444 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 A8MUI8 341 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 POTECB2RU33 542 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 MRPL12P52815 198 aaKnown RBP17.45■□□□□ 0.38
CRAT-201ENST00000318080 TUBB8Q3ZCM7 444 aa17.45■□□□□ 0.38
CRAT-201ENST00000318080 GJB7Q6PEY0 223 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms