RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 FLAD1Q8NFF5 587 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 GDF3Q9NR23 364 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 ANKRD31Q8N7Z5 1873 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 GAKO14976 1311 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 PGRMC1O00264 195 aaKnown RBP16.25■□□□□ 0.19
TFE3-201ENST00000315869 MED24O75448 989 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 USP8P40818 1118 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 TMEM119Q4V9L6 283 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 ZNF473Q8WTR7 871 aaKnown RBP16.25■□□□□ 0.19
TFE3-201ENST00000315869 LRRC45Q96CN5 670 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 INPP4AQ96PE3 977 aaPredicted RBP16.25■□□□□ 0.19
TFE3-201ENST00000315869 BCAS3Q9H6U6 928 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 GCNT4Q9P109 453 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 FBXL5Q9UKA1 691 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 NOC2LQ9Y3T9 749 aaKnown RBP16.25■□□□□ 0.19
TFE3-201ENST00000315869 RSPH10B2B2RC85 870 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 PPP1R11O60927 126 aaPredicted RBP16.24■□□□□ 0.19
TFE3-201ENST00000315869 RSPH10BP0C881 870 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 MYBP10242 640 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 CASP4P49662 377 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 CCDC121Q6ZUS5 278 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 NLRP14Q86W24 1093 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 CCDC114Q96M63 670 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 BHMT2Q9H2M3 363 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 IKZF4Q9H2S9 585 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 ATP8A1Q9Y2Q0 1164 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 EPB41P11171 864 aaKnown RBP16.24■□□□□ 0.19
TFE3-201ENST00000315869 KRT13P13646 458 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 DHX9Q08211 1270 aaKnown RBP16.24■□□□□ 0.19
TFE3-201ENST00000315869 RBM26Q5T8P6 1007 aaKnown RBP16.24■□□□□ 0.19
TFE3-201ENST00000315869 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 ARFGAP2Q8N6H7 521 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 METTL13Q8N6R0 699 aa16.24■□□□□ 0.19
TFE3-201ENST00000315869 YDJCA8MPS7 323 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 ZBTB5O15062 677 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 TTI1O43156 1089 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 DPEP1P16444 411 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 HNRNPH1P31943 449 aaKnown RBP16.23■□□□□ 0.19
TFE3-201ENST00000315869 HSD17B3P37058 310 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 MDH1P40925 334 aaKnown RBP16.23■□□□□ 0.19
TFE3-201ENST00000315869 CDR1P51861 262 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 CPLX4Q7Z7G2 160 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 SPICE1Q8N0Z3 855 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 ERMNQ8TAM6 284 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 PIGOQ8TEQ8 1089 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 PRMT6Q96LA8 375 aaPredicted RBP16.23■□□□□ 0.19
TFE3-201ENST00000315869 ANO3Q9BYT9 981 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 EPN3Q9H201 632 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 DHX36Q9H2U1 1008 aaKnown RBP16.23■□□□□ 0.19
TFE3-201ENST00000315869 SNED1Q8TER0 1413 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 ADAMTSL1Q8N6G6 1762 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 ABCB11O95342 1321 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 HOXA13P31271 388 aaPredicted RBP16.23■□□□□ 0.19
TFE3-201ENST00000315869 QRICH1Q2TAL8 776 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 CABS1Q96KC9 395 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 SPDYE3A6NKU9 549 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 MEFVO15553 781 aaPredicted RBP16.23■□□□□ 0.19
TFE3-201ENST00000315869 HLA-DOAP06340 250 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 ZNF211Q13398 564 aaPredicted RBP16.23■□□□□ 0.19
TFE3-201ENST00000315869 MAEAQ7L5Y9 396 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 KSR1Q8IVT5 923 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 SELENOSQ9BQE4 189 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 VEZTQ9HBM0 779 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 NAGPAQ9UK23 515 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 SLX4Q8IY92 1834 aa16.23■□□□□ 0.19
TFE3-201ENST00000315869 FGGP02679 453 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 RDXP35241 583 aaKnown RBP16.22■□□□□ 0.19
TFE3-201ENST00000315869 CYP2J2P51589 502 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 KCNA1Q09470 495 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 ZYXQ15942 572 aaKnown RBP16.22■□□□□ 0.19
TFE3-201ENST00000315869 PTGISQ16647 500 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 ZCWPW2Q504Y3 356 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 TRIM51Q9BSJ1 452 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 A6NNZ2 444 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 HMGB1P1B2RPK0 211 aaPredicted RBP16.22■□□□□ 0.19
TFE3-201ENST00000315869 EDIL3O43854 480 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 IRX3P78415 501 aaPredicted RBP16.22■□□□□ 0.19
TFE3-201ENST00000315869 SKOR1P84550 965 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 TUBB8Q3ZCM7 444 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 COBLL1Q53SF7 1204 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 DACT2Q5SW24 774 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 GLYCTKQ8IVS8 523 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 RUBCNQ92622 972 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 REEP2Q9BRK0 252 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 DNAJC18Q9H819 358 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 RGL1Q9NZL6 768 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 PCDHGC5Q9Y5F6 944 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 LRRN2O75325 713 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 FAM13AO94988 1023 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 SHMT1P34896 483 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 ORC2Q13416 577 aaPredicted RBP16.22■□□□□ 0.19
TFE3-201ENST00000315869 PPP4R3AQ6IN85 833 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 KDM7AQ6ZMT4 941 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 TPH2Q8IWU9 490 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 MYCT1Q8N699 235 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 CCDC26Q8TAB7 109 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 MYCBPAPQ8TBZ2 947 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 LMBR1Q8WVP7 490 aa16.22■□□□□ 0.19
TFE3-201ENST00000315869 UTP11Q9Y3A2 253 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms