RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 PCDHA10Q9Y5I2 948 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 KDM6AO15550 1401 aaPredicted RBP9.77□□□□□ -0.85
CTC1-201ENST00000315684 AFPP02771 609 aaKnown RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 ATICP31939 592 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 SNX1Q13596 522 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 DCAF4L1Q3SXM0 396 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 CHMP6Q96FZ7 201 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 MAP3K20Q9NYL2 800 aaKnown RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 CWC15Q9P013 229 aaKnown RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 PRR23AA6NEV1 266 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 LCP1P13796 627 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 ZBTB16Q05516 673 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 SMARCAD1Q9H4L7 1026 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 MAD1L1Q9Y6D9 718 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 P4HBP07237 508 aaKnown RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 GCLMP48507 274 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 ZNF543Q08ER8 600 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 VGLL4Q14135 290 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 VEPH1Q14D04 833 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 MGAT5BQ3V5L5 792 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 ANAPC5Q9UJX4 755 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 TMEM88BA6NKF7 163 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 BUB1BO60566 1050 aaPredicted RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 VTNP04004 478 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 PDGFRBP09619 1106 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 CYP2C19P33261 490 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 PSMC5P62195 406 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 C16orf86Q6ZW13 317 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 PDCL2Q8N4E4 241 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 MRPL4Q9BYD3 311 aaKnown RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 KIAA1468Q9P260 1216 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 C3P01024 1663 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 RASA1P20936 1047 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 TCF7P36402 384 aaPredicted RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 DESI2Q9BSY9 194 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 SMYD2Q9NRG4 433 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 DCCP43146 1447 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 CSDE1O75534 798 aaKnown RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 VCAM1P19320 739 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 MXI1P50539 228 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 RPS6P62753 249 aaKnown RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 MYLK4Q86YV6 388 aaPredicted RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 TRMT2AQ8IZ69 625 aaKnown RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 SH3TC2Q8TF17 1288 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 ACAP3Q96P50 834 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 VPS37BQ9H9H4 285 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 BARHL2Q9NY43 387 aa9.76□□□□□ -0.85
CTC1-201ENST00000315684 UTP11Q9Y3A2 253 aaKnown RBP9.76□□□□□ -0.85
CTC1-201ENST00000315684 ZC3H11AO75152 810 aaKnown RBP eCLIP9.75□□□□□ -0.85
CTC1-201ENST00000315684 SIK2Q9H0K1 926 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 HMX1Q9NP08 348 aaPredicted RBP9.75□□□□□ -0.85
CTC1-201ENST00000315684 LIFRP42702 1097 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 BEX3Q00994 111 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 SMAD1Q15797 465 aaKnown RBP9.75□□□□□ -0.85
CTC1-201ENST00000315684 HS1BP3Q53T59 392 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 FAM133AQ8N9E0 248 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 SLC17A8Q8NDX2 589 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 CCDC26Q8TAB7 109 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 CCDC110Q8TBZ0 833 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 L3MBTL3Q96JM7 780 aaPredicted RBP9.75□□□□□ -0.85
CTC1-201ENST00000315684 APOL5Q9BWW9 433 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 CREB3O43889 395 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 EVI5O60447 810 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 HIP1RO75146 1068 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 PRKCBP05771 671 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 ITGA4P13612 1032 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 ALDH7A1P49419 539 aaKnown RBP9.75□□□□□ -0.85
CTC1-201ENST00000315684 BCAR1P56945 870 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 LY6KQ17RY6 165 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 GLRA4Q5JXX5 417 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 KCTD6Q8NC69 237 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 AK8Q96MA6 479 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 METTL14Q9HCE5 456 aaKnown RBP9.75□□□□□ -0.85
CTC1-201ENST00000315684 NGRNQ9NPE2 291 aaKnown RBP9.75□□□□□ -0.85
CTC1-201ENST00000315684 PXDNQ92626 1479 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 PFASO15067 1338 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 PITPNM2Q9BZ72 1349 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 A8MXQ7 604 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 KCNK3O14649 394 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 PDHBP11177 359 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 CMA1P23946 247 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 RECQLP46063 649 aaPredicted RBP9.75□□□□□ -0.85
CTC1-201ENST00000315684 ACOT2P49753 483 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 KRT17Q04695 432 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 AMHR2Q16671 573 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 SLFN12LQ6IEE8 588 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 SPATA2LQ8IUW3 424 aaPredicted RBP9.75□□□□□ -0.85
CTC1-201ENST00000315684 MB21D1Q8N884 522 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 MCPH1Q8NEM0 835 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 SCYL1Q96KG9 808 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 GPRC5DQ9NZD1 345 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 DLC1Q96QB1 1528 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 NLRP11P59045 1033 aaKnown RBP9.75□□□□□ -0.85
CTC1-201ENST00000315684 MAP7D1Q3KQU3 841 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 XPO4Q9C0E2 1151 aaKnown RBP9.75□□□□□ -0.85
CTC1-201ENST00000315684 AMFRQ9UKV5 643 aa9.75□□□□□ -0.85
CTC1-201ENST00000315684 MED7O43513 233 aa9.74□□□□□ -0.85
CTC1-201ENST00000315684 RPS6KA1Q15418 735 aa9.74□□□□□ -0.85
CTC1-201ENST00000315684 SEPT1Q8WYJ6 367 aa9.74□□□□□ -0.85
CTC1-201ENST00000315684 TUBGCP2Q9BSJ2 902 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms