RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 MYH11P35749 1972 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 DDTLA6NHG4 134 aaPredicted RBP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 FAM86B1E9PN63 330 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 MEIS1O00470 390 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 EIF3HO15372 352 aaKnown RBP eCLIP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 AKAP3O75969 853 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 FAM13AO94988 1023 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 GCNT3O95395 438 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 NDUFB10O96000 172 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 FAM86B2P0C5J1 330 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 ACTN1P12814 892 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 LMNB1P20700 586 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 PSMC2P35998 433 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 HSPA9P38646 679 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 NOP2P46087 812 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 CARSP49589 748 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 CLUL1Q15846 466 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 RBM26Q5T8P6 1007 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 MEX3CQ5U5Q3 659 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 SLFN11Q7Z7L1 901 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 LRRC57Q8N9N7 239 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 TPCN2Q8NHX9 752 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 SLC35C1Q96A29 364 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 VTI1AQ96AJ9 217 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 CCDC43Q96MW1 224 aaKnown RBP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 ZIM3Q96PE6 472 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 TRERF1Q96PN7 1200 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 PACSIN1Q9BY11 444 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 ISCUQ9H1K1 167 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 BHMT2Q9H2M3 363 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 TAF1DQ9H5J8 278 aaPredicted RBP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 SIX2Q9NPC8 291 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 KCND2Q9NZV8 630 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 NFU1Q9UMS0 254 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 COL11A2P13942 1736 aaPredicted RBP10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 ATRNL1Q5VV63 1379 aa10.54□□□□□ -0.72
LSMEM1-201ENST00000312849 SRRM3A6NNA2 597 aaPredicted RBP10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 BHMG1C9JSJ3 638 aaPredicted RBP10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 PGRMC1O00264 195 aaKnown RBP10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 KCNK3O14649 394 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 TCP10Q12799 353 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 PPP2R5EQ16537 467 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 DCAF17Q5H9S7 520 aaPredicted RBP10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 TCERG1LQ5VWI1 586 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 RINT1Q6NUQ1 792 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 KDM7AQ6ZMT4 941 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 SPATS2Q86XZ4 545 aaKnown RBP10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 C10orf67Q8IYJ2 551 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 CASKIN2Q8WXE0 1202 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 IFT81Q8WYA0 676 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 ZBTB9Q96C00 473 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 LRRC45Q96CN5 670 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 P2RX7Q99572 595 aaKnown RBP10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 SLITRK6Q9H5Y7 841 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 KCNQ5Q9NR82 932 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 LCMT1Q9UIC8 334 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 HMGB1P1B2RPK0 211 aaPredicted RBP10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 EBAG9O00559 213 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 RFX1P22670 979 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 RBM5P52756 815 aaKnown RBP eCLIP10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 GNGT1P63211 74 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 PPP2R5CQ13362 524 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 MYBPC2Q14324 1141 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 ENOX2Q16206 610 aaKnown RBP10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 USH1GQ495M9 461 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 TTMPQ5BVD1 217 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 DACT2Q5SW24 774 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 FOXR1Q6PIV2 292 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 SH3BP5LQ7L8J4 393 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 PEX26Q7Z412 305 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 EFCAB13Q8IY85 973 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 FAM186BQ8IYM0 893 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 RASGEF1CQ8N431 466 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 FLAD1Q8NFF5 587 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 CCDC26Q8TAB7 109 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 PPM1EQ8WY54 764 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 BORCS6Q96GS4 357 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 HSD17B14Q9BPX1 270 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 RUSC1Q9BVN2 902 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 STK33Q9BYT3 514 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 GCNT4Q9P109 453 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 ODF2LQ9ULJ1 636 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 STXBP5LQ9Y2K9 1186 aa10.53□□□□□ -0.72
LSMEM1-201ENST00000312849 NCANO14594 1321 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 AFF2P51816 1311 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 RBBP6Q7Z6E9 1792 aaKnown RBP10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 IGLV3-22A0A075B6J6 115 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 GOLGA6L10A6NI86 522 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 RAD51CO43502 376 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 CEP104O60308 925 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 ZEB2O60315 1214 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 TRIM37O94972 964 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 SOX5P35711 763 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 MTMR3Q13615 1198 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 PPP2R5AQ15172 486 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 C1orf186Q6ZWK4 172 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 B4GALNT4Q76KP1 1039 aa10.52□□□□□ -0.73
LSMEM1-201ENST00000312849 HS2ST1Q7LGA3 356 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms