RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 COL1A2P08123 1366 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 A0A0U1RQG5 324 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 POLR2DO15514 142 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 EYA4O95677 639 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 MCM4P33991 863 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 CDK7P50613 346 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 NPEPPSP55786 919 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 PTPN11Q06124 597 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 PPFIA1Q13136 1202 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 SNW1Q13573 536 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 HIC1Q14526 733 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 SNX17Q15036 470 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 PLA2G4FQ68DD2 849 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 OTUD6AQ7L8S5 288 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 FMR1NBQ8N0W7 255 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 PDILTQ8N807 584 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 RAD54LQ92698 747 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 PAWRQ96IZ0 340 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 PYM1Q9BRP8 204 aaKnown RBP14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 SEZ6LQ9BYH1 1024 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 CYP26B1Q9NR63 512 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 PCDH10Q9P2E7 1040 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 HDAC6Q9UBN7 1215 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 SEPT9Q9UHD8 586 aaPredicted RBP14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 GTF2IRD1Q9UHL9 959 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 NRCAMQ92823 1304 aa14.12□□□□□ -0.15
CHMP2A-201ENST00000312547 MBLAC1A4D2B0 266 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 RRN3P2A6NIE6 340 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 GOLGA6L22H0YM25 854 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 ARVCFO00192 962 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 ACTN4O43707 911 aaKnown RBP14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 PLA2G4BP0C869 781 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 LIG1P18858 919 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 STAT6P42226 847 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 SYKP43405 635 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 SLC12A3P55017 1021 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 FAM160A1Q05DH4 1040 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 GRIK4Q16099 956 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 MARCH8Q5T0T0 291 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 C1orf53Q5VUE5 145 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 TRMT1LQ7Z2T5 733 aaKnown RBP14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 C7orf31Q8N865 590 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 SYT2Q8N9I0 419 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 IQUBQ8NA54 791 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 RASSF8Q8NHQ8 419 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 PPP1R13LQ8WUF5 828 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 LMBR1Q8WVP7 490 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 CEP170P1Q96L14 293 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 SH2D3AQ9BRG2 576 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 SENP6Q9GZR1 1112 aaPredicted RBP14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 BHMT2Q9H2M3 363 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 CUEDC2Q9H467 287 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 C11orf49Q9H6J7 331 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 SETD4Q9NVD3 440 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 USP25Q9UHP3 1055 aa14.11□□□□□ -0.15
CHMP2A-201ENST00000312547 IGKV6-21A0A0C4DH24 114 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 C22orf31O95567 290 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 MTERF2Q49AM1 385 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 TPRNQ4KMQ1 711 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 XKR9Q5GH70 373 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 PRPF38BQ5VTL8 546 aaKnown RBP14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 SLC39A5Q6ZMH5 540 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 NECAB2Q7Z6G3 386 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 TRAPPC12Q8WVT3 735 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 LARP4BQ92615 738 aaKnown RBP14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 VTI1AQ96AJ9 217 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 DHX58Q96C10 678 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 CTAGE1Q96RT6 745 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 DHX33Q9H6R0 707 aaKnown RBP14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 MAGEF1Q9HAY2 307 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 PDLIM7Q9NR12 457 aa14.1□□□□□ -0.15
CHMP2A-201ENST00000312547 C17orf102A2RUQ5 167 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 ARHGEF35A5YM69 484 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 MAFO75444 373 aaPredicted RBP14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 ZNF202O95125 648 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 SLFN14P0C7P3 912 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 RFC5P40937 340 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 CHMP4BP1P59074 171 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 ZNF200P98182 395 aaPredicted RBP14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 MCM6Q14566 821 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 LONRF3Q496Y0 759 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 GDF6Q6KF10 455 aaPredicted RBP14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 RINT1Q6NUQ1 792 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 PADI6Q6TGC4 694 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 MTHFD1LQ6UB35 978 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 C1orf186Q6ZWK4 172 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 LINC01465Q8N7H1 131 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 MTRQ99707 1265 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 RUSC1Q9BVN2 902 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 XPNPEP1Q9NQW7 623 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 KBTBD4Q9NVX7 518 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 SERTAD1Q9UHV2 236 aa14.09□□□□□ -0.15
CHMP2A-201ENST00000312547 SZT2Q5T011 3432 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 MAGEB2O15479 319 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 NR1I2O75469 434 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 DGAT1O75907 488 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 GNAT1P11488 350 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 CYP11B2P19099 503 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 KLRC1P26715 233 aa14.08□□□□□ -0.16
CHMP2A-201ENST00000312547 IGBP1P78318 339 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms