RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 NR5A1Q13285 461 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 TJAP1Q5JTD0 557 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 ZBTB41Q5SVQ8 909 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 TSSK1BQ9BXA7 367 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 SENP1Q9P0U3 644 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 TFAMQ00059 246 aaKnown RBP16.55■□□□□ 0.24
HCFC1-201ENST00000310441 SULF1Q8IWU6 871 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 TADA1Q96BN2 335 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 SZRD1Q7Z422 152 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 KIAA1586Q9HCI6 787 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 FRMPD2Q68DX3 1309 aaPredicted RBP16.54■□□□□ 0.24
HCFC1-201ENST00000310441 PSMA2P25787 234 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 PPP1R2P1Q96PQ5 205 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 C4BPBP20851 252 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 MLH3Q9UHC1 1453 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 RASA4BC9J798 803 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 RASA4O43374 803 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 NAA35Q5VZE5 725 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 ZNF555Q8NEP9 628 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 FMNL1O95466 1100 aaPredicted RBP16.54■□□□□ 0.24
HCFC1-201ENST00000310441 OSBPP22059 807 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 ARL6IP4Q66PJ3 421 aaKnown RBP16.54■□□□□ 0.24
HCFC1-201ENST00000310441 RPF1Q9H9Y2 349 aaKnown RBP16.54■□□□□ 0.24
HCFC1-201ENST00000310441 MXI1P50539 228 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 CNGA3Q16281 694 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 HIBCHQ6NVY1 386 aaPredicted RBP16.54■□□□□ 0.24
HCFC1-201ENST00000310441 DPP9Q86TI2 863 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 STAMQ92783 540 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 PCDHA13Q9Y5I0 950 aa16.54■□□□□ 0.24
HCFC1-201ENST00000310441 NEURL1BA8MQ27 555 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 GGPS1O95749 300 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 DTX3LQ8TDB6 740 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 UIMC1Q96RL1 719 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 PAGR1Q9BTK6 254 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 ABCE1P61221 599 aaKnown RBP16.53■□□□□ 0.24
HCFC1-201ENST00000310441 NUGGCQ68CJ6 796 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 FIS1Q9Y3D6 152 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 RNF103-CHMP3A0A140T963 221 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 NAALADL2Q58DX5 795 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 ARHGEF1Q92888 912 aaKnown RBP16.53■□□□□ 0.24
HCFC1-201ENST00000310441 PPARGC1AQ9UBK2 798 aaKnown RBP16.53■□□□□ 0.24
HCFC1-201ENST00000310441 DAB1O75553 588 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 PSAPP07602 524 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 THEM5Q8N1Q8 247 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 TBC1D19Q8N5T2 526 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 SH3GL3Q99963 347 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 ZSCAN32Q9NX65 697 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 GRID2IPA4D2P6 1211 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 INO80B-WBP1J3KQ70 363 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 CASP8Q14790 479 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 TOGARAM2Q6ZUX3 1019 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 CDC26Q8NHZ8 85 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 SLC26A7Q8TE54 656 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 INO80BQ9C086 356 aaPredicted RBP16.53■□□□□ 0.24
HCFC1-201ENST00000310441 PKD2L2Q9NZM6 624 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 E5RI56 91 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 DEFA1P59665 94 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 DEFA3P59666 94 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
HCFC1-201ENST00000310441 ZAP70P43403 619 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 LAMB3Q13751 1172 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 LRRC31Q6UY01 552 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 KIAA2013Q8IYS2 634 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 EYA1Q99502 592 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 UBE2TQ9NPD8 197 aaPredicted RBP16.53■□□□□ 0.24
HCFC1-201ENST00000310441 SFMBT1Q9UHJ3 866 aa16.53■□□□□ 0.24
HCFC1-201ENST00000310441 C16orf96A6NNT2 1141 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 TAF5LO75529 589 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 NDUFA10O95299 355 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 CEP55Q53EZ4 464 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 PAIP2BQ9ULR5 123 aaKnown RBP16.52■□□□□ 0.24
HCFC1-201ENST00000310441 KRR1Q13601 381 aaKnown RBP16.52■□□□□ 0.24
HCFC1-201ENST00000310441 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 ITPRIPL1Q6GPH6 555 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 USP17L12C9JPN9 530 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 USP17L21D6R901 530 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 ACSL3O95573 720 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 RBL2Q08999 1139 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 C2orf54Q08AI8 447 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 TESK2Q96S53 571 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 ZBTB38Q8NAP3 1195 aaPredicted RBP16.52■□□□□ 0.24
HCFC1-201ENST00000310441 FAF2Q96CS3 445 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 USP28Q96RU2 1077 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 ATP11BQ9Y2G3 1177 aa16.52■□□□□ 0.24
HCFC1-201ENST00000310441 NCAPG2Q86XI2 1143 aa16.52■□□□□ 0.23
HCFC1-201ENST00000310441 TRIM8Q9BZR9 551 aa16.52■□□□□ 0.23
HCFC1-201ENST00000310441 SH3GLB2Q9NR46 395 aa16.52■□□□□ 0.23
HCFC1-201ENST00000310441 TBXAS1P24557 533 aaPredicted RBP16.52■□□□□ 0.23
HCFC1-201ENST00000310441 RRM2BQ7LG56 351 aa16.52■□□□□ 0.23
HCFC1-201ENST00000310441 ULK4Q96C45 1275 aa16.52■□□□□ 0.23
HCFC1-201ENST00000310441 TAGAPQ8N103 731 aa16.52■□□□□ 0.23
HCFC1-201ENST00000310441 SH3TC2Q8TF17 1288 aa16.52■□□□□ 0.23
HCFC1-201ENST00000310441 DYDC2Q96IM9 177 aa16.52■□□□□ 0.23
HCFC1-201ENST00000310441 FARP1Q9Y4F1 1045 aaPredicted RBP16.52■□□□□ 0.23
HCFC1-201ENST00000310441 CIAO1O76071 339 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 SLC4A1P02730 911 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 DYNLT1P63172 113 aa16.51■□□□□ 0.23
HCFC1-201ENST00000310441 INPP5AQ14642 412 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms