RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ANAPC7Q9UJX3 599 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 CDC42BPGQ6DT37 1551 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 IQANK1A0A1B0GTG1 560 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 MARK3P27448 753 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 CACNB3P54284 484 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 ZNF341Q9BYN7 854 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 PREX2Q70Z35 1606 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 GPR162Q16538 588 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 SLFN12LQ6IEE8 588 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 SYNE4Q8N205 404 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 FBXO41Q8TF61 875 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 NLRP4Q96MN2 994 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 SYNGAP1Q96PV0 1343 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 COASYQ13057 564 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 GSPT2Q8IYD1 628 aaKnown RBP14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP27XA6NNY8 438 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 CLEC4GQ6UXB4 293 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 ANO9A1A5B4 782 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 NCF2P19878 526 aaPredicted RBP14.97□□□□□ -0.01
PRKCB-201ENST00000303531 GUCY2CP25092 1073 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 HNRNPH2P55795 449 aaKnown RBP14.97□□□□□ -0.01
PRKCB-201ENST00000303531 IQCB1Q15051 598 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 TERF2Q15554 542 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 HSP90AA5PQ58FG0 334 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 G3BP2Q9UN86 482 aaKnown RBP14.97□□□□□ -0.01
PRKCB-201ENST00000303531 RFX7Q2KHR2 1363 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP17L15C9J2P7 530 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP17L13C9JLJ4 530 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP17L11C9JVI0 530 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP17L18D6R9N7 530 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP17L22D6RA61 530 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP17L17D6RBQ6 530 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP17L19D6RCP7 530 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP17L20D6RJB6 530 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 ZNF18P17022 549 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 KPNA2P52292 529 aaKnown RBP14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP17L24Q0WX57 530 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 SLC12A1Q13621 1099 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 USP17L6PQ6QN14 398 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 BANK1Q8NDB2 785 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 ELAC2Q9BQ52 826 aaKnown RBP14.97□□□□□ -0.01
PRKCB-201ENST00000303531 SAYSD1Q9NPB0 183 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 CNOT8Q9UFF9 292 aaKnown RBP14.97□□□□□ -0.01
PRKCB-201ENST00000303531 ADAM21Q9UKJ8 722 aa14.97□□□□□ -0.01
PRKCB-201ENST00000303531 TJP3O95049 919 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 MMEP08473 750 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 KCNH2Q12809 1159 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 MXD3Q9BW11 206 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 ZDHHC9Q9Y397 364 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 ESRRAP11474 423 aaPredicted RBP14.96□□□□□ -0.01
PRKCB-201ENST00000303531 NPR1P16066 1061 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 GGCXP38435 758 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 TAF11Q15544 211 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 TBC1D9BQ66K14 1250 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 MINPP1Q9UNW1 487 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 TYW5A2RUC4 315 aaKnown RBP14.96□□□□□ -0.01
PRKCB-201ENST00000303531 HDLBPQ00341 1268 aaKnown RBP14.96□□□□□ -0.01
PRKCB-201ENST00000303531 TXNRD1Q16881 649 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 SLC44A5Q8NCS7 719 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 ADAM22Q9P0K1 906 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 MIF4GDA9UHW6 222 aaKnown RBP14.96□□□□□ -0.01
PRKCB-201ENST00000303531 TMTC4Q5T4D3 741 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 TMEM260Q9NX78 707 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 INTUQ9ULD6 942 aa14.96□□□□□ -0.01
PRKCB-201ENST00000303531 GCLMP48507 274 aa14.96□□□□□ -0.02
PRKCB-201ENST00000303531 SLC12A6Q9UHW9 1150 aa14.96□□□□□ -0.02
PRKCB-201ENST00000303531 PVALEFA0A1B0GWK0 134 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 PRELPP51888 382 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 JAK3P52333 1124 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 NUDCD1Q96RS6 583 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 TSPYL2Q9H2G4 693 aaPredicted RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 DCP1AQ9NPI6 582 aaPredicted RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 FNDC3AQ9Y2H6 1198 aaKnown RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 IPO5O00410 1097 aaKnown RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 TEX33O43247 280 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 RCAN1P53805 252 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 ZNF394Q53GI3 561 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 HEMGNQ9BXL5 484 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 NBPF3Q9H094 633 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 GNGT2O14610 69 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 MAPK13O15264 365 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 RYBPQ8N488 228 aaPredicted RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 POTEB3A0JP26 581 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 POTECB2RU33 542 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 MTMR1Q13613 665 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 ATG16L1Q676U5 607 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 NFRKBQ6P4R8 1299 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 POTEBQ6S5H4 581 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 TBC1D1Q86TI0 1168 aaPredicted RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 FAF2Q96CS3 445 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 CPSF3Q9UKF6 684 aaKnown RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 ZBTB24O43167 697 aaPredicted RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 GPC5P78333 572 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 THOC1Q96FV9 657 aaKnown RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 MAP3K7O43318 606 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 NCK2O43639 380 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 LDHAP00338 332 aaKnown RBP14.95□□□□□ -0.02
PRKCB-201ENST00000303531 FAM83BQ5T0W9 1011 aa14.95□□□□□ -0.02
PRKCB-201ENST00000303531 PITPNM3Q9BZ71 974 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms