RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 UBR3Q6ZT12 1888 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 H0YGN5 161 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 EML1O00423 815 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 MSH4O15457 936 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 TGFB1I1O43294 461 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 ITGA4P13612 1032 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 LSP1P33241 339 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 AP3B2Q13367 1082 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 BMT2Q1RMZ1 405 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 USH1GQ495M9 461 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 OR2W6PQ8NHA6 318 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 BORCS6Q96GS4 357 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 PBKQ96KB5 322 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 ATP6V1G3Q96LB4 118 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 CCDC17Q96LX7 622 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 DDX47Q9H0S4 455 aaKnown RBP17.81■□□□□ 0.44
OTUB1-201ENST00000301453 TYW1Q9NV66 732 aaKnown RBP17.81■□□□□ 0.44
OTUB1-201ENST00000301453 RGL1Q9NZL6 768 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 VAV3Q9UKW4 847 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 NFS1Q9Y697 457 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 EP400Q96L91 3159 aa17.81■□□□□ 0.44
OTUB1-201ENST00000301453 KIF13BQ9NQT8 1826 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 NDUFAB1O14561 156 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 OPLAHO14841 1288 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 SART1O43290 800 aaKnown RBP17.8■□□□□ 0.44
OTUB1-201ENST00000301453 NR1D1P20393 614 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 FLT3P36888 993 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 SF3B2Q13435 895 aaKnown RBP17.8■□□□□ 0.44
OTUB1-201ENST00000301453 HHIPL2Q6UWX4 724 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 SH3BP5LQ7L8J4 393 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 SLFN11Q7Z7L1 901 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 MICALL1Q8N3F8 863 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 DCAF4Q8WV16 495 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 KAT2BQ92831 832 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 ZC3H12CQ9C0D7 883 aaKnown RBP17.8■□□□□ 0.44
OTUB1-201ENST00000301453 TBX3O15119 743 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 CALUO43852 315 aaPredicted RBP17.8■□□□□ 0.44
OTUB1-201ENST00000301453 HSD17B3P37058 310 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 ITGB3BPQ13352 177 aaPredicted RBP17.8■□□□□ 0.44
OTUB1-201ENST00000301453 HLTFQ14527 1009 aaKnown RBP eCLIP17.8■□□□□ 0.44
OTUB1-201ENST00000301453 CEP85LQ5SZL2 805 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 GCNT4Q9P109 453 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 NYAP2Q9P242 653 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 USP21Q9UK80 565 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 NOC2LQ9Y3T9 749 aaKnown RBP17.8■□□□□ 0.44
OTUB1-201ENST00000301453 PCDHB13Q9Y5F0 798 aa17.8■□□□□ 0.44
OTUB1-201ENST00000301453 GCNT3O95395 438 aa17.79■□□□□ 0.44
OTUB1-201ENST00000301453 HOXA13P31271 388 aaPredicted RBP17.79■□□□□ 0.44
OTUB1-201ENST00000301453 SREBF1P36956 1147 aa17.79■□□□□ 0.44
OTUB1-201ENST00000301453 ERMNQ8TAM6 284 aa17.79■□□□□ 0.44
OTUB1-201ENST00000301453 TEKT1Q969V4 418 aa17.79■□□□□ 0.44
OTUB1-201ENST00000301453 TMBIM4Q9HC24 238 aa17.79■□□□□ 0.44
OTUB1-201ENST00000301453 FBXL5Q9UKA1 691 aa17.79■□□□□ 0.44
OTUB1-201ENST00000301453 FLOT1O75955 427 aa17.79■□□□□ 0.44
OTUB1-201ENST00000301453 SEC24CP53992 1094 aa17.79■□□□□ 0.44
OTUB1-201ENST00000301453 CERKLQ49MI3 558 aaPredicted RBP17.79■□□□□ 0.44
OTUB1-201ENST00000301453 MAATS1Q7Z4T9 603 aa17.79■□□□□ 0.44
OTUB1-201ENST00000301453 C1orf131Q8NDD1 294 aaKnown RBP17.79■□□□□ 0.44
OTUB1-201ENST00000301453 LNX1Q8TBB1 728 aaPredicted RBP17.79■□□□□ 0.44
OTUB1-201ENST00000301453 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.79■□□□□ 0.442e-8■□□□□ 9.5
OTUB1-201ENST00000301453 AMNQ9BXJ7 453 aa17.79■□□□□ 0.44
OTUB1-201ENST00000301453 ZMYM2Q9UBW7 1377 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 FAM170AA1A519 330 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 TMCO5BA8MYB1 307 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 F5H6K3 240 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 PGRMC1O00264 195 aaKnown RBP17.78■□□□□ 0.44
OTUB1-201ENST00000301453 ZBTB39O15060 712 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 GFPT2O94808 682 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 H2AFZP0C0S5 128 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 CRKP46108 304 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 PPARDQ03181 441 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 KLRC3Q07444 240 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 H2AFVQ71UI9 128 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 NT5DC3Q86UY8 548 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 PIGOQ8TEQ8 1089 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 U2AF1L4Q8WU68 220 aaKnown RBP17.78■□□□□ 0.44
OTUB1-201ENST00000301453 EIF2AK1Q9BQI3 630 aaKnown RBP17.78■□□□□ 0.44
OTUB1-201ENST00000301453 SMCHD1A6NHR9 2005 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 A6NNZ2 444 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 JAG1P78504 1218 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 TUBB8Q3ZCM7 444 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 ZC2HC1CQ53FD0 456 aaPredicted RBP17.78■□□□□ 0.44
OTUB1-201ENST00000301453 RINT1Q6NUQ1 792 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 PEX26Q7Z412 305 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 KSR1Q8IVT5 923 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 RASGEF1CQ8N431 466 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 SLC30A5Q8TAD4 765 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 CALR3Q96L12 384 aaKnown RBP17.78■□□□□ 0.44
OTUB1-201ENST00000301453 EPN3Q9H201 632 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 FAM198AQ9UFP1 575 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 AMACRQ9UHK6 382 aa17.78■□□□□ 0.44
OTUB1-201ENST00000301453 SLC16A3O15427 465 aaKnown RBP17.77■□□□□ 0.44
OTUB1-201ENST00000301453 PPP1R37O75864 691 aa17.77■□□□□ 0.44
OTUB1-201ENST00000301453 NMT1P30419 496 aaKnown RBP17.77■□□□□ 0.44
OTUB1-201ENST00000301453 MDH1P40925 334 aaKnown RBP17.77■□□□□ 0.44
OTUB1-201ENST00000301453 MMP14P50281 582 aa17.77■□□□□ 0.44
OTUB1-201ENST00000301453 GALCP54803 685 aa17.77■□□□□ 0.44
OTUB1-201ENST00000301453 COG2Q14746 738 aa17.77■□□□□ 0.44
OTUB1-201ENST00000301453 PTGISQ16647 500 aa17.77■□□□□ 0.44
OTUB1-201ENST00000301453 IFI16Q16666 785 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms