RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 GOLGA1Q92805 767 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 PARD6BQ9BYG5 372 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 ADAMTS1Q9UHI8 967 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 RGPD3A6NKT7 1758 aaPredicted RBP16.01■□□□□ 0.15
SMG8-201ENST00000300917 RGPD4Q7Z3J3 1758 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 EIF3CLB5ME19 914 aaKnown RBP16■□□□□ 0.15
SMG8-201ENST00000300917 K7ENM7 598 aa16■□□□□ 0.15
SMG8-201ENST00000300917 PGM5Q15124 567 aa16■□□□□ 0.15
SMG8-201ENST00000300917 SFMBT2Q5VUG0 894 aa16■□□□□ 0.15
SMG8-201ENST00000300917 MCF2L2Q86YR7 1114 aa16■□□□□ 0.15
SMG8-201ENST00000300917 NOA1Q8NC60 698 aaKnown RBP16■□□□□ 0.15
SMG8-201ENST00000300917 SPAG5Q96R06 1193 aa16■□□□□ 0.15
SMG8-201ENST00000300917 EIF3CQ99613 913 aaKnown RBP16■□□□□ 0.15
SMG8-201ENST00000300917 KIFC3Q9BVG8 833 aa16■□□□□ 0.15
SMG8-201ENST00000300917 SMARCAL1Q9NZC9 954 aa16■□□□□ 0.15
SMG8-201ENST00000300917 FHOD1Q9Y613 1164 aa16■□□□□ 0.15
SMG8-201ENST00000300917 SETQ01105 290 aaPredicted RBP16■□□□□ 0.15
SMG8-201ENST00000300917 EPM2AIP1Q7L775 607 aaPredicted RBP16■□□□□ 0.15
SMG8-201ENST00000300917 SRGAP1Q7Z6B7 1085 aa16■□□□□ 0.15
SMG8-201ENST00000300917 AGO4Q9HCK5 861 aaKnown RBP16■□□□□ 0.15
SMG8-201ENST00000300917 TYW1Q9NV66 732 aaKnown RBP16■□□□□ 0.15
SMG8-201ENST00000300917 A0A1W2PQJ5 194 aa16■□□□□ 0.15
SMG8-201ENST00000300917 NCK2O43639 380 aa16■□□□□ 0.15
SMG8-201ENST00000300917 EPB41P11171 864 aaKnown RBP16■□□□□ 0.15
SMG8-201ENST00000300917 DCAF15Q66K64 600 aa16■□□□□ 0.15
SMG8-201ENST00000300917 SALL4Q9UJQ4 1053 aa16■□□□□ 0.15
SMG8-201ENST00000300917 DHX15O43143 795 aaKnown RBP15.99■□□□□ 0.15
SMG8-201ENST00000300917 PLA2G6O60733 806 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 FIGNQ5HY92 759 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 ZSWIM2Q8NEG5 633 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 CAGE1Q8TC20 777 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 SECISBP2LQ93073 1101 aaKnown RBP15.99■□□□□ 0.15
SMG8-201ENST00000300917 PDCD2LQ9BRP1 358 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 AJAP1Q9UKB5 411 aaPredicted RBP15.99■□□□□ 0.15
SMG8-201ENST00000300917 PDXKO00764 312 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 GNA14O95837 355 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 AFPP02771 609 aaKnown RBP15.99■□□□□ 0.15
SMG8-201ENST00000300917 MATR3P43243 847 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMG8-201ENST00000300917 VAV2P52735 878 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 EXOC3L4Q17RC7 722 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 EDRF1Q3B7T1 1238 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 CCDC170Q8IYT3 715 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 DAW1Q8N136 415 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 ELMO3Q96BJ8 720 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 EHD2Q9NZN4 543 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 ZMYND10O75800 440 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 H2AFXP16104 143 aaPredicted RBP15.99■□□□□ 0.15
SMG8-201ENST00000300917 KLHL30Q0D2K2 578 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 TMCO3Q6UWJ1 677 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 FAM186BQ8IYM0 893 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 PACSIN1Q9BY11 444 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 TRAF3IP3Q9Y228 551 aa15.99■□□□□ 0.15
SMG8-201ENST00000300917 KCTD19Q17RG1 926 aaPredicted RBP15.98■□□□□ 0.15
SMG8-201ENST00000300917 XKR9Q5GH70 373 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 ZNF720Q7Z2F6 126 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 PLEKHA4Q9H4M7 779 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 PXMP2Q9NR77 195 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 GCNT4Q9P109 453 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 CEP72Q9P209 647 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 CTAGE15A4D2H0 777 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 GOLGA8IPA6NC78 632 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 GOLGA8JA6NMD2 632 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 LRRN2O75325 713 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 CCNE2O96020 404 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 CTAGE8P0CG41 777 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 TMEM132BQ14DG7 1078 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 SLC9C1Q4G0N8 1177 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 FAM102BQ5T8I3 360 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 HGSNATQ68CP4 663 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 HS2ST1Q7LGA3 356 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 CTAGE6Q86UF2 777 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 CTAGE4Q8IX94 777 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 MMS19Q96T76 1030 aa15.98■□□□□ 0.15
SMG8-201ENST00000300917 ZMYM2Q9UBW7 1377 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 PSME4Q14997 1843 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 BACH1O14867 736 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 EXOC3O60645 756 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 P4HBP07237 508 aaKnown RBP15.97■□□□□ 0.15
SMG8-201ENST00000300917 RPL13P26373 211 aaKnown RBP15.97■□□□□ 0.15
SMG8-201ENST00000300917 PEX3P56589 373 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 MOB2Q70IA6 237 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 RSRC2Q7L4I2 434 aaKnown RBP15.97■□□□□ 0.15
SMG8-201ENST00000300917 RIT2Q99578 217 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 GPRC5DQ9NZD1 345 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 USP20Q9Y2K6 914 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 A0A087X0T9 212 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 ADM5C9JUS6 153 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 SLC16A4O15374 487 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 FAM228BP0C875 321 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 USP14P54578 494 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 RNASE9P60153 205 aaKnown RBP15.97■□□□□ 0.15
SMG8-201ENST00000300917 SLC35C1Q96A29 364 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 PNKPQ96T60 521 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 GOLPH3Q9H4A6 298 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 SUGCTQ9HAC7 445 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 UBIAD1Q9Y5Z9 338 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 SAR1BQ9Y6B6 198 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 FRMPD4Q14CM0 1322 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 CCDC169A6NNP5 214 aa15.97■□□□□ 0.15
SMG8-201ENST00000300917 NR3C2P08235 984 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms