RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 NAA15Q9BXJ9 866 aaKnown RBP15.73■□□□□ 0.11
C9orf3-202ENST00000297979 TRAF3IP3Q9Y228 551 aa15.73■□□□□ 0.11
C9orf3-202ENST00000297979 PCDHA10Q9Y5I2 948 aa15.73■□□□□ 0.11
C9orf3-202ENST00000297979 POTEB2H3BUK9 544 aa15.73■□□□□ 0.11
C9orf3-202ENST00000297979 NKRFO15226 690 aaKnown RBP eCLIP15.73■□□□□ 0.112e-9■■■■□ 24.8
C9orf3-202ENST00000297979 HIP1RO75146 1068 aa15.73■□□□□ 0.11
C9orf3-202ENST00000297979 EIF3JO75822 258 aaKnown RBP15.73■□□□□ 0.11
C9orf3-202ENST00000297979 CCDC40Q4G0X9 1142 aa15.73■□□□□ 0.11
C9orf3-202ENST00000297979 JPH1Q9HDC5 661 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-202ENST00000297979 PDXKO00764 312 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 CCP110O43303 1012 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 CALUO43852 315 aaPredicted RBP15.72■□□□□ 0.11
C9orf3-202ENST00000297979 HOXD13P35453 343 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 ERGIC2Q96RQ1 377 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 NDST4Q9H3R1 872 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 TXNRD2Q9NNW7 524 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 TYW1Q9NV66 732 aaKnown RBP15.72■□□□□ 0.11
C9orf3-202ENST00000297979 RBPJLQ9UBG7 517 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 MYH11P35749 1972 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 UBE4BO95155 1302 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 ICAM3P32942 547 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 SYCP1Q15431 976 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 STXBP4Q6ZWJ1 553 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 FAM178BQ8IXR5 827 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 SLC9A2Q9UBY0 812 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 R3HCC1Q9Y3T6 440 aaKnown RBP15.72■□□□□ 0.11
C9orf3-202ENST00000297979 DOCK5Q9H7D0 1870 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 CETN3O15182 167 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 NMT1P30419 496 aaKnown RBP15.72■□□□□ 0.11
C9orf3-202ENST00000297979 MARSP56192 900 aaKnown RBP15.72■□□□□ 0.11
C9orf3-202ENST00000297979 MAPK7Q13164 816 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 ADAM9Q13443 819 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 ODR4Q5SWX8 454 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 FAM133AQ8N9E0 248 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 PPP1R13BQ96KQ4 1090 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 FIZ1Q96SL8 496 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 NUP58Q9BVL2 599 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 ANKEF1Q9NU02 776 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 ABHD10Q9NUJ1 306 aa15.72■□□□□ 0.11
C9orf3-202ENST00000297979 SOWAHBA6NEL2 793 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 PSAPP07602 524 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 NR2F2P24468 414 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 EDNRBP24530 442 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 FSTL1Q12841 308 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 NYAP1Q6ZVC0 841 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 DAW1Q8N136 415 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 RETREG2Q8NC44 543 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 ATP6V0A1Q93050 837 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 PNMA3Q9UL41 463 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 WDR81Q562E7 1941 aa15.71■□□□□ 0.11
C9orf3-202ENST00000297979 DKC1O60832 514 aaKnown RBP eCLIP15.71■□□□□ 0.13e-6■■□□□ 13.1
C9orf3-202ENST00000297979 FECHP22830 423 aa15.71■□□□□ 0.1
C9orf3-202ENST00000297979 TIPINQ9BVW5 301 aa15.71■□□□□ 0.1
C9orf3-202ENST00000297979 LRRC37A2A6NM11 1700 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 TTC26A0AVF1 554 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 RNF225M0QZC1 329 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-202ENST00000297979 BACH1O14867 736 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 USO1O60763 962 aaKnown RBP15.7■□□□□ 0.1
C9orf3-202ENST00000297979 TNNT1P13805 278 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 KRT9P35527 623 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 FKBP1BP68106 108 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 PTPN14Q15678 1187 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 UTP14CQ5TAP6 766 aaKnown RBP15.7■□□□□ 0.1
C9orf3-202ENST00000297979 ZNF720Q7Z2F6 126 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 PCMTD1Q96MG8 357 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-202ENST00000297979 GABBR1Q9UBS5 961 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 CAPN11Q9UMQ6 739 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 TRIM21P19474 475 aaKnown RBP15.7■□□□□ 0.1
C9orf3-202ENST00000297979 ACTR2P61160 394 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 Q3C1V9 767 aa15.7■□□□□ 0.1
C9orf3-202ENST00000297979 GTF3C2Q8WUA4 911 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-202ENST00000297979 LARSQ9P2J5 1176 aaKnown RBP15.7■□□□□ 0.1
C9orf3-202ENST00000297979 LUC7L2Q9Y383 392 aaKnown RBP15.7■□□□□ 0.1
C9orf3-202ENST00000297979 ZMYM2Q9UBW7 1377 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 TMEM150BA6NC51 233 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 RPL13P26373 211 aaKnown RBP15.69■□□□□ 0.1
C9orf3-202ENST00000297979 SP4Q02446 784 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 KCNA1Q09470 495 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 ZC2HC1CQ53FD0 456 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-202ENST00000297979 XKR9Q5GH70 373 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 PLA2G4FQ68DD2 849 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 SEPT14Q6ZU15 432 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 TRIM59Q8IWR1 403 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 IQCDQ96DY2 449 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 TTYH3Q9C0H2 523 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 R3HDMLQ9H3Y0 253 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 SOWAHDA6NJG2 315 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 ZSCAN12O43309 604 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 NR3C1P04150 777 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 KLK7P49862 253 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 SP2Q02086 613 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 FIGNQ5HY92 759 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 MIS18BP1Q6P0N0 1132 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 MAEAQ7L5Y9 396 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 DRC1Q96MC2 740 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 MPHOSPH6Q99547 160 aaKnown RBP15.69■□□□□ 0.1
C9orf3-202ENST00000297979 MROH8Q9H579 483 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 RRAGCQ9HB90 399 aa15.69■□□□□ 0.1
C9orf3-202ENST00000297979 GBA2Q9HCG7 927 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-202ENST00000297979 PCDHB13Q9Y5F0 798 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms