RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 NEUROG2Q9H2A3 272 aa18.41■□□□□ 0.54
CHRNE-201ENST00000293780 TAF1DQ9H5J8 278 aaPredicted RBP18.41■□□□□ 0.54
CHRNE-201ENST00000293780 TMCO5BA8MYB1 307 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 EML1O00423 815 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 RXRBP28702 533 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 LIG3P49916 1009 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 CERKLQ49MI3 558 aaPredicted RBP18.4■□□□□ 0.54
CHRNE-201ENST00000293780 Q4G0T1 1027 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 KDM7AQ6ZMT4 941 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 MAATS1Q7Z4T9 603 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 CD302Q8IX05 232 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 MKL1Q969V6 931 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 SLC35C1Q96A29 364 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 CCDC17Q96LX7 622 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 DDX47Q9H0S4 455 aaKnown RBP18.4■□□□□ 0.54
CHRNE-201ENST00000293780 ISCUQ9H1K1 167 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 GCNT4Q9P109 453 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 BZW2Q9Y6E2 419 aaKnown RBP18.4■□□□□ 0.54
CHRNE-201ENST00000293780 LTBP1Q14766 1721 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 DDX3XO00571 662 aaKnown RBP eCLIP18.4■□□□□ 0.54
CHRNE-201ENST00000293780 NDUFAB1O14561 156 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 ITGA4P13612 1032 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 AP3B2Q13367 1082 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 CEP85LQ5SZL2 805 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 MOXD1Q6UVY6 613 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 OR2W6PQ8NHA6 318 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 DCAF4Q8WV16 495 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 PBKQ96KB5 322 aa18.4■□□□□ 0.54
CHRNE-201ENST00000293780 SLC26A4O43511 780 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 NR1D1P20393 614 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 HSPA9P38646 679 aaKnown RBP18.39■□□□□ 0.53
CHRNE-201ENST00000293780 PRKCIP41743 596 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 CRKP46108 304 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 JAM2P57087 298 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 ICE2Q659A1 982 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 HHIPL2Q6UWX4 724 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 C10orf71Q711Q0 1435 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 ACTRT1Q8TDG2 376 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 PIGOQ8TEQ8 1089 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 AMNQ9BXJ7 453 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 TYW1Q9NV66 732 aaKnown RBP18.39■□□□□ 0.53
CHRNE-201ENST00000293780 NENFQ9UMX5 172 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 NOC2LQ9Y3T9 749 aaKnown RBP18.39■□□□□ 0.53
CHRNE-201ENST00000293780 CES2O00748 559 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 SART1O43290 800 aaKnown RBP18.39■□□□□ 0.53
CHRNE-201ENST00000293780 GFPT2O94808 682 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 GDF11O95390 407 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 LSP1P33241 339 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 POTEAQ6S8J7 498 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 KSR1Q8IVT5 923 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 U2AF1L4Q8WU68 220 aaKnown RBP18.39■□□□□ 0.53
CHRNE-201ENST00000293780 ATP6V1G3Q96LB4 118 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 VAV3Q9UKW4 847 aa18.39■□□□□ 0.53
CHRNE-201ENST00000293780 KLRG2A4D1S0 409 aaPredicted RBP18.38■□□□□ 0.53
CHRNE-201ENST00000293780 SPDYE3A6NKU9 549 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 F5H6K3 240 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 ZBTB39O15060 712 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 TGFB1I1O43294 461 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 FLOT1O75955 427 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 FLT3P36888 993 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 HSD17B3P37058 310 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 GTF2A1P52655 376 aaPredicted RBP18.38■□□□□ 0.53
CHRNE-201ENST00000293780 IRX3P78415 501 aaPredicted RBP18.38■□□□□ 0.53
CHRNE-201ENST00000293780 KLRC3Q07444 240 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
CHRNE-201ENST00000293780 UAP1Q16222 522 aaPredicted RBP18.38■□□□□ 0.53
CHRNE-201ENST00000293780 SH3BP5LQ7L8J4 393 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 PEX26Q7Z412 305 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 EIF2AK1Q9BQI3 630 aaKnown RBP18.38■□□□□ 0.53
CHRNE-201ENST00000293780 CENPHQ9H3R5 247 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 NYAP2Q9P242 653 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 NMT1P30419 496 aaKnown RBP18.38■□□□□ 0.53
CHRNE-201ENST00000293780 CTTNQ14247 550 aaKnown RBP18.38■□□□□ 0.53
CHRNE-201ENST00000293780 FBXO11Q86XK2 927 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHRNE-201ENST00000293780 STXBP5LQ9Y2K9 1186 aa18.38■□□□□ 0.53
CHRNE-201ENST00000293780 SMCHD1A6NHR9 2005 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 PGRMC1O00264 195 aaKnown RBP18.37■□□□□ 0.53
CHRNE-201ENST00000293780 OPLAHO14841 1288 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 TBX3O15119 743 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 H2AFZP0C0S5 128 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 SREBF1P36956 1147 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 IFI16Q16666 785 aaKnown RBP18.37■□□□□ 0.53
CHRNE-201ENST00000293780 BMT2Q1RMZ1 405 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 ZC2HC1CQ53FD0 456 aaPredicted RBP18.37■□□□□ 0.53
CHRNE-201ENST00000293780 H2AFVQ71UI9 128 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 KIAA0825Q8IV33 1275 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 AMACRQ9UHK6 382 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 KRIT1O00522 736 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 TBCAO75347 108 aaKnown RBP18.37■□□□□ 0.53
CHRNE-201ENST00000293780 SEC24CP53992 1094 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 ICA1Q05084 483 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 ITGB3BPQ13352 177 aaPredicted RBP18.37■□□□□ 0.53
CHRNE-201ENST00000293780 COG2Q14746 738 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 RINT1Q6NUQ1 792 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 SLFN11Q7Z7L1 901 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 DAAM2Q86T65 1068 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 LNX1Q8TBB1 728 aaPredicted RBP18.37■□□□□ 0.53
CHRNE-201ENST00000293780 DBNDD1Q9H9R9 158 aa18.37■□□□□ 0.53
CHRNE-201ENST00000293780 TMBIM4Q9HC24 238 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms