RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 TRPV2Q9Y5S1 764 aa28.23■■■□□ 2.11
PDF-201ENST00000288022 ABHD14A-ACY1A0A1B0GW23 586 aa28.22■■■□□ 2.11
PDF-201ENST00000288022 DDX11L8A8MPP1 907 aa28.22■■■□□ 2.11
PDF-201ENST00000288022 MAGEB2O15479 319 aa28.22■■■□□ 2.11
PDF-201ENST00000288022 P4HBP07237 508 aaKnown RBP28.22■■■□□ 2.11
PDF-201ENST00000288022 GHRP10912 638 aa28.22■■■□□ 2.11
PDF-201ENST00000288022 DNAJB2P25686 324 aa28.22■■■□□ 2.11
PDF-201ENST00000288022 ORC2Q13416 577 aaPredicted RBP28.22■■■□□ 2.11
PDF-201ENST00000288022 MTMR9Q96QG7 549 aa28.22■■■□□ 2.11
PDF-201ENST00000288022 SLC9A7Q96T83 725 aa28.22■■■□□ 2.11
PDF-201ENST00000288022 PBX4Q9BYU1 374 aa28.22■■■□□ 2.11
PDF-201ENST00000288022 SIP14410 1827 aa28.21■■■□□ 2.11
PDF-201ENST00000288022 EFCAB14O75071 495 aa28.21■■■□□ 2.11
PDF-201ENST00000288022 PBX2P40425 430 aa28.21■■■□□ 2.11
PDF-201ENST00000288022 WDR5P61964 334 aaKnown RBP28.21■■■□□ 2.11
PDF-201ENST00000288022 TBC1D8BQ0IIM8 1120 aa28.21■■■□□ 2.11
PDF-201ENST00000288022 NBR1Q14596 966 aa28.21■■■□□ 2.11
PDF-201ENST00000288022 MTERF2Q49AM1 385 aa28.21■■■□□ 2.11
PDF-201ENST00000288022 KIAA0319LQ8IZA0 1049 aa28.21■■■□□ 2.11
PDF-201ENST00000288022 DYDC2Q96IM9 177 aa28.21■■■□□ 2.11
PDF-201ENST00000288022 IFIH1Q9BYX4 1025 aaKnown RBP28.21■■■□□ 2.11
PDF-201ENST00000288022 MSRAQ9UJ68 235 aa28.21■■■□□ 2.11
PDF-201ENST00000288022 TMEM150BA6NC51 233 aa28.2■■■□□ 2.1
PDF-201ENST00000288022 K7ELQ4 463 aaPredicted RBP28.2■■■□□ 2.1
PDF-201ENST00000288022 OR52Z1P0C646 297 aa28.2■■■□□ 2.1
PDF-201ENST00000288022 RABGGTBP53611 331 aa28.2■■■□□ 2.1
PDF-201ENST00000288022 CYP4A11Q02928 519 aa28.2■■■□□ 2.1
PDF-201ENST00000288022 RAB30Q15771 203 aa28.2■■■□□ 2.1
PDF-201ENST00000288022 FAM161BQ96MY7 647 aa28.2■■■□□ 2.1
PDF-201ENST00000288022 LXNQ9BS40 222 aa28.2■■■□□ 2.1
PDF-201ENST00000288022 NIFKQ9BYG3 293 aaKnown RBP28.2■■■□□ 2.1
PDF-201ENST00000288022 CELF4Q9BZC1 486 aaKnown RBP28.2■■■□□ 2.1
PDF-201ENST00000288022 RGL1Q9NZL6 768 aa28.2■■■□□ 2.1
PDF-201ENST00000288022 GINS2Q9Y248 185 aa28.2■■■□□ 2.1
PDF-201ENST00000288022 LAMA3Q16787 3333 aa28.2■■■□□ 2.1
PDF-201ENST00000288022 TMOD1P28289 359 aa28.19■■■□□ 2.1
PDF-201ENST00000288022 CLCN3P51790 818 aa28.19■■■□□ 2.1
PDF-201ENST00000288022 CTTNQ14247 550 aaKnown RBP28.19■■■□□ 2.1
PDF-201ENST00000288022 LPIN1Q14693 890 aa28.19■■■□□ 2.1
PDF-201ENST00000288022 FBXO47Q5MNV8 452 aa28.19■■■□□ 2.1
PDF-201ENST00000288022 EFCAB12Q6NXP0 572 aa28.19■■■□□ 2.1
PDF-201ENST00000288022 PHOSPHO2Q8TCD6 241 aa28.19■■■□□ 2.1
PDF-201ENST00000288022 APBB2Q92870 758 aa28.19■■■□□ 2.1
PDF-201ENST00000288022 TIFAQ96CG3 184 aa28.19■■■□□ 2.1
PDF-201ENST00000288022 SH2D3AQ9BRG2 576 aa28.19■■■□□ 2.1
PDF-201ENST00000288022 SUGCTQ9HAC7 445 aa28.19■■■□□ 2.1
PDF-201ENST00000288022 STBD1O95210 358 aa28.18■■■□□ 2.1
PDF-201ENST00000288022 DEFB103AP81534 67 aa28.18■■■□□ 2.1
PDF-201ENST00000288022 PLA2G4FQ68DD2 849 aa28.18■■■□□ 2.1
PDF-201ENST00000288022 TPH2Q8IWU9 490 aa28.18■■■□□ 2.1
PDF-201ENST00000288022 LRRC71Q8N4P6 559 aa28.18■■■□□ 2.1
PDF-201ENST00000288022 MAP7D2Q96T17 732 aa28.18■■■□□ 2.1
PDF-201ENST00000288022 PPP1R16BQ96T49 567 aa28.18■■■□□ 2.1
PDF-201ENST00000288022 EIF2AK1Q9BQI3 630 aaKnown RBP28.18■■■□□ 2.1
PDF-201ENST00000288022 AKT3Q9Y243 479 aa28.18■■■□□ 2.1
PDF-201ENST00000288022 POTEMA6NI47 508 aa28.17■■■□□ 2.1
PDF-201ENST00000288022 VTNP04004 478 aa28.17■■■□□ 2.1
PDF-201ENST00000288022 TOB1P50616 345 aaPredicted RBP28.17■■■□□ 2.1
PDF-201ENST00000288022 TARBP2Q15633 366 aaKnown RBP28.17■■■□□ 2.1
PDF-201ENST00000288022 TSHZ1Q6ZSZ6 1077 aa28.17■■■□□ 2.1
PDF-201ENST00000288022 ANO5Q75V66 913 aa28.17■■■□□ 2.1
PDF-201ENST00000288022 HERC6Q8IVU3 1022 aa28.17■■■□□ 2.1
PDF-201ENST00000288022 ZSWIM4Q9H7M6 989 aa28.17■■■□□ 2.1
PDF-201ENST00000288022 FOXD4L1Q9NU39 408 aa28.17■■■□□ 2.1
PDF-201ENST00000288022 WRAP73Q9P2S5 460 aaPredicted RBP28.17■■■□□ 2.1
PDF-201ENST00000288022 PCDHB6Q9Y5E3 794 aa28.17■■■□□ 2.1
PDF-201ENST00000288022 EVPLQ92817 2033 aa28.17■■■□□ 2.1
PDF-201ENST00000288022 GBF1Q92538 1859 aa28.17■■■□□ 2.1
PDF-201ENST00000288022 SLC34A2O95436 690 aa28.16■■■□□ 2.1
PDF-201ENST00000288022 TECP42680 631 aa28.16■■■□□ 2.1
PDF-201ENST00000288022 C4orf19Q8IY42 314 aa28.16■■■□□ 2.1
PDF-201ENST00000288022 ZBED2Q9BTP6 218 aa28.16■■■□□ 2.1
PDF-201ENST00000288022 NKX2-4Q9H2Z4 354 aa28.16■■■□□ 2.1
PDF-201ENST00000288022 PCDHA11Q9Y5I1 949 aa28.16■■■□□ 2.1
PDF-201ENST00000288022 VPS37CA5D8V6 355 aaPredicted RBP28.15■■■□□ 2.1
PDF-201ENST00000288022 AMHP03971 560 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 PDCP20941 246 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 CD52P31358 61 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 KIZQ2M2Z5 673 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 TMEM266Q2M3C6 531 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 RILPL1Q5EBL4 403 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.15■■■□□ 2.1
PDF-201ENST00000288022 TMCO2Q7Z6W1 182 aaPredicted RBP28.15■■■□□ 2.1
PDF-201ENST00000288022 HSCBQ8IWL3 235 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 USP38Q8NB14 1042 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 NEK9Q8TD19 979 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 SNX21Q969T3 373 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 YBX2Q9Y2T7 364 aaKnown RBP28.15■■■□□ 2.1
PDF-201ENST00000288022 KDM3AQ9Y4C1 1321 aa28.15■■■□□ 2.1
PDF-201ENST00000288022 TMEM265A0A087WTH1 108 aa28.14■■■□□ 2.1
PDF-201ENST00000288022 SLITRK3O94933 977 aa28.14■■■□□ 2.1
PDF-201ENST00000288022 MYOGP15173 224 aa28.14■■■□□ 2.1
PDF-201ENST00000288022 YWHABP31946 246 aaKnown RBP28.14■■■□□ 2.1
PDF-201ENST00000288022 OTUD6AQ7L8S5 288 aa28.14■■■□□ 2.1
PDF-201ENST00000288022 MYOCDQ8IZQ8 938 aa28.14■■■□□ 2.1
PDF-201ENST00000288022 INTS4Q96HW7 963 aaKnown RBP28.14■■■□□ 2.1
PDF-201ENST00000288022 CEP170P1Q96L14 293 aa28.14■■■□□ 2.1
PDF-201ENST00000288022 TTYH1Q9H313 450 aaPredicted RBP28.14■■■□□ 2.1
PDF-201ENST00000288022 SEMA6BQ9H3T3 888 aa28.14■■■□□ 2.1
PDF-201ENST00000288022 AGO3Q9H9G7 860 aaKnown RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms