RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 FAM135BQ49AJ0 1406 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 VCAM1P19320 739 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 EPM2AIP1Q7L775 607 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 SLC35F6Q8N357 371 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 RUBCNLQ9H714 662 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 CCDC87Q9NVE4 849 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 ZNF711Q9Y462 761 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 TEX14Q8IWB6 1497 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 PLEKHG3A1L390 1219 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 UBAP1LF5GYI3 381 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 OTULINQ96BN8 352 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 FAF2Q96CS3 445 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 STAMBPL1Q96FJ0 436 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 FAM89AQ96GI7 184 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 GCOM2Q9BZD3 368 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 EML4Q9HC35 981 aaKnown RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 RGS12O14924 1447 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 GOLGA8JA6NMD2 632 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 H0Y3Z8 333 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 TBC1D4O60343 1298 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 TRIM71Q2Q1W2 868 aaKnown RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 GPKOWQ92917 476 aaPredicted RBP eCLIP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 TUBGCP3Q96CW5 907 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 SLITRK6Q9H5Y7 841 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 SEPT3Q9UH03 358 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 BLMP54132 1417 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 GOLGA8IPA6NC78 632 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 MAGEA9P43362 315 aa9.33□□□□□ -0.92
NIPBL-201ENST00000282516 CAPRIN2Q6IMN6 1127 aaKnown RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 RBM46Q8TBY0 533 aaKnown RBP9.33□□□□□ -0.92
NIPBL-201ENST00000282516 CALB1P05937 261 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 TRIP13Q15645 432 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-201ENST00000282516 JAK2O60674 1132 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 DNAJC6O75061 913 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 C19orf60Q96EN9 201 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 RBM41Q96IZ5 413 aaKnown RBP9.32□□□□□ -0.92
NIPBL-201ENST00000282516 C10orf88Q9H8K7 445 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 GINM1Q9NU53 330 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 PLAAQ9Y263 795 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 PFKFB2O60825 505 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 RANBP1P43487 201 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 STXBP2Q15833 593 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 TRAF7Q6Q0C0 670 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 PNMA1Q8ND90 353 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 PPIP5K2O43314 1243 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 HDLBPQ00341 1268 aaKnown RBP9.32□□□□□ -0.92
NIPBL-201ENST00000282516 CCDC15Q0P6D6 951 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 DPP9Q86TI2 863 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 BTN2A2Q8WVV5 523 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 SRPK1Q96SB4 655 aaKnown RBP9.32□□□□□ -0.92
NIPBL-201ENST00000282516 SERPING1P05155 500 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 GCFC2P16383 781 aaKnown RBP9.32□□□□□ -0.92
NIPBL-201ENST00000282516 SERPINB4P48594 390 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 HEXIM2Q96MH2 286 aaKnown RBP9.32□□□□□ -0.92
NIPBL-201ENST00000282516 ARHGEF12Q9NZN5 1544 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 RASA4BC9J798 803 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 RASA4O43374 803 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 GFPT2O94808 682 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 KRT16P08779 473 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 PRKG1Q13976 671 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 ASPRV1Q53RT3 343 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 PBXIP1Q96AQ6 731 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 OSBPL1AQ9BXW6 950 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 LSG1Q9H089 658 aaKnown RBP9.32□□□□□ -0.92
NIPBL-201ENST00000282516 ADNPQ9H2P0 1102 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 EHD2Q9NZN4 543 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 CFAP73A6NFT4 308 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 C16orf96A6NNT2 1141 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 NUGGCQ68CJ6 796 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 ITPRIPL1Q6GPH6 555 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 DBNDD2Q9BQY9 259 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 ZBTB12Q9Y330 459 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-201ENST00000282516 SEC31AO94979 1220 aaKnown RBP9.32□□□□□ -0.92
NIPBL-201ENST00000282516 MXI1P50539 228 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 ICE2Q659A1 982 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 PPP4R3CPQ6ZMV5 832 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 TRIM69Q86WT6 500 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 AGBL1Q96MI9 1066 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 RWDD2AQ9UIY3 292 aa9.32□□□□□ -0.92
NIPBL-201ENST00000282516 THRAP3Q9Y2W1 955 aaKnown RBP9.32□□□□□ -0.92
NIPBL-201ENST00000282516 INO80B-WBP1J3KQ70 363 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 ENC1O14682 589 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 RALBP11234 206 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 HSPA2P54652 639 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 HORMAD1Q86X24 394 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 TTC30BQ8N4P2 665 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 ARMC2Q8NEN0 867 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 INO80BQ9C086 356 aaPredicted RBP9.31□□□□□ -0.92
NIPBL-201ENST00000282516 TRAPPC8Q9Y2L5 1435 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 SPDYE5A6NIY4 337 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 HAUS5O94927 633 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 PMS2P54278 862 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 SPDYE7PQ495Y7 208 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 TBC1D1Q86TI0 1168 aaPredicted RBP9.31□□□□□ -0.92
NIPBL-201ENST00000282516 NCAPG2Q86XI2 1143 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 SH3KBP1Q96B97 665 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 SERPINB1P30740 379 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 ELF1P32519 619 aa9.31□□□□□ -0.92
NIPBL-201ENST00000282516 ABCE1P61221 599 aaKnown RBP9.31□□□□□ -0.92
NIPBL-201ENST00000282516 KIRREL3Q8IZU9 778 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms