RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 RILPQ96NA2 401 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 FAM114A2Q9NRY5 505 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 KRT1P04264 644 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 RASA1P20936 1047 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 PLTPP55058 493 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 ZNF394Q53GI3 561 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 ARMCX2Q7L311 632 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 CCNYQ8ND76 341 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 MED4Q9NPJ6 270 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 NYAP2Q9P242 653 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 FOXN1O15353 648 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 ARL4AP40617 200 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 GNGT1P63211 74 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
USP6NL-201ENST00000277575 PBKQ96KB5 322 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 ZNF302Q9NR11 478 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 WDR70Q9NW82 654 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 IQCA1LA6NCM1 817 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 GOLGA8KD6RF30 607 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 TROVE2P10155 538 aaKnown RBP eCLIP12.17□□□□□ -0.46
USP6NL-201ENST00000277575 COG2Q14746 738 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 EIF2AK1Q9BQI3 630 aaKnown RBP12.17□□□□□ -0.46
USP6NL-201ENST00000277575 TOPORSQ9NS56 1045 aaPredicted RBP12.17□□□□□ -0.46
USP6NL-201ENST00000277575 FAM205CA6NFA0 338 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 FCER1AP12319 257 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 PHKA2P46019 1235 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 ANTXR2P58335 489 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 DYNLT1P63172 113 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 TTC31Q49AM3 519 aaPredicted RBP12.17□□□□□ -0.46
USP6NL-201ENST00000277575 INTS5Q6P9B9 1019 aaKnown RBP12.17□□□□□ -0.46
USP6NL-201ENST00000277575 SIX6OS1Q8N1H7 587 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 ARHGEF2Q92974 986 aaKnown RBP12.17□□□□□ -0.46
USP6NL-201ENST00000277575 FAM213AQ9BRX8 229 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 PCDHA10Q9Y5I2 948 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 TAF6LQ9Y6J9 622 aa12.17□□□□□ -0.46
USP6NL-201ENST00000277575 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-201ENST00000277575 ECEL1O95672 775 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 ARPP19P56211 112 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 APBA1Q02410 837 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 MTMR2Q13614 643 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 EPHA7Q15375 998 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 ZNF568Q3ZCX4 644 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 CLEC17AQ6ZS10 378 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 ERICH1Q86X53 443 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 OR6B3Q8NGW1 331 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 CDKL2Q92772 493 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.16□□□□□ -0.46
USP6NL-201ENST00000277575 POC1B-GALNT4F8VUJ3 575 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 MCF2LO15068 1137 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 ZBTB24O43167 697 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-201ENST00000277575 BUB1BO60566 1050 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-201ENST00000277575 RFX1P22670 979 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 ARHGAP25P42331 645 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 PDIA5Q14554 519 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 RSBN1LQ6PCB5 846 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-201ENST00000277575 DSTYKQ6XUX3 929 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 RHOT2Q8IXI1 618 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 FAM151AQ8WW52 585 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 LPAR1Q92633 364 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 CCSER1Q9C0I3 900 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 IL25Q9H293 177 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 CCDC68Q9H2F9 335 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 CEP72Q9P209 647 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 ZNF70Q9UC06 446 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-201ENST00000277575 FBXO2Q9UK22 296 aaPredicted RBP12.16□□□□□ -0.46
USP6NL-201ENST00000277575 RIMBP3CA6NJZ7 1639 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 RIMBP3BA6NNM3 1639 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 RIMBP3Q9UFD9 1639 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 EIF3CLB5ME19 914 aaKnown RBP12.16□□□□□ -0.46
USP6NL-201ENST00000277575 MYL3P08590 195 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 C16orf86Q6ZW13 317 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 BBS5Q8N3I7 341 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 KAZALD1Q96I82 304 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 EIF3CQ99613 913 aaKnown RBP12.16□□□□□ -0.46
USP6NL-201ENST00000277575 BPIFA3Q9BQP9 254 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 PHF20Q9BVI0 1012 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 TEX13BQ9BXU2 312 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 ZMYND15Q9H091 742 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 PRPSAP2O60256 369 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 GNAT1P11488 350 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 EPHB4P54760 987 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 ATP11AP98196 1134 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 PDE11AQ9HCR9 933 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 NGRNQ9NPE2 291 aaKnown RBP12.16□□□□□ -0.46
USP6NL-201ENST00000277575 RGL1Q9NZL6 768 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 ADAM22Q9P0K1 906 aa12.16□□□□□ -0.46
USP6NL-201ENST00000277575 GPR75-ASB3A0A0A6YYF3 556 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 SAT1P21673 171 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 TPD52P55327 224 aaPredicted RBP12.15□□□□□ -0.46
USP6NL-201ENST00000277575 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 FASTKD5Q7L8L6 764 aaKnown RBP12.15□□□□□ -0.46
USP6NL-201ENST00000277575 MTRQ99707 1265 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 ABHD10Q9NUJ1 306 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 MKRN1Q9UHC7 482 aaKnown RBP12.15□□□□□ -0.46
USP6NL-201ENST00000277575 WDR46O15213 610 aaKnown RBP12.15□□□□□ -0.46
USP6NL-201ENST00000277575 KCTD16Q68DU8 428 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 SPATA24Q86W54 205 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 ARHGAP24Q8N264 748 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms