RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 DDX41Q9UJV9 622 aaKnown RBP16.08■□□□□ 0.16
TRIM23-202ENST00000274327 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
TRIM23-202ENST00000274327 HIP1RO75146 1068 aa16.07■□□□□ 0.16
TRIM23-202ENST00000274327 ARIH2O95376 493 aa16.07■□□□□ 0.16
TRIM23-202ENST00000274327 MYBP10242 640 aa16.07■□□□□ 0.16
TRIM23-202ENST00000274327 TBX2Q13207 712 aaPredicted RBP16.07■□□□□ 0.16
TRIM23-202ENST00000274327 ANO5Q75V66 913 aa16.07■□□□□ 0.16
TRIM23-202ENST00000274327 GPR142Q7Z601 462 aa16.07■□□□□ 0.16
TRIM23-202ENST00000274327 ZNF467Q7Z7K2 595 aaPredicted RBP16.07■□□□□ 0.16
TRIM23-202ENST00000274327 MYCT1Q8N699 235 aa16.07■□□□□ 0.16
TRIM23-202ENST00000274327 CACTINQ8WUQ7 758 aaKnown RBP16.07■□□□□ 0.16
TRIM23-202ENST00000274327 TAB2Q9NYJ8 693 aa16.07■□□□□ 0.16
TRIM23-202ENST00000274327 MAGEC2Q9UBF1 373 aaPredicted RBP16.07■□□□□ 0.16
TRIM23-202ENST00000274327 GSTTP1A0A1W2PQM5 241 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 TMEM150BA6NC51 233 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 KIF3CO14782 793 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 EIF3DO15371 548 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRIM23-202ENST00000274327 SORBS3O60504 671 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 FGFR1OPO95684 399 aaKnown RBP16.06■□□□□ 0.16
TRIM23-202ENST00000274327 HOXD13P35453 343 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 SP4Q02446 784 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 GRB14Q14449 540 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 PLA2G4FQ68DD2 849 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 METTL7BQ6UX53 244 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 OTUD6AQ7L8S5 288 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 EEPD1Q7L9B9 569 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 NELFCDQ8IXH7 590 aa16.06■□□□□ 0.16
TRIM23-202ENST00000274327 CNOT6LQ96LI5 555 aaKnown RBP16.06■□□□□ 0.16
TRIM23-202ENST00000274327 MRPL44Q9H9J2 332 aaKnown RBP16.06■□□□□ 0.16
TRIM23-202ENST00000274327 MAFBQ9Y5Q3 323 aaPredicted RBP16.06■□□□□ 0.16
TRIM23-202ENST00000274327 FAM155AB1AL88 458 aaPredicted RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 MAPK4P31152 587 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 ARID5BQ14865 1188 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 PTPN21Q16825 1174 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 XKR9Q5GH70 373 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 CCDC62Q6P9F0 684 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 PPP4R3CPQ6ZMV5 832 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 ARMCX2Q7L311 632 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 LRRC8AQ8IWT6 810 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 FBXO16Q8IX29 292 aaPredicted RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 VPS16Q9H269 839 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 TRAF3IP3Q9Y228 551 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 IVNS1ABPQ9Y6Y0 642 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 UBE4BO95155 1302 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 N4BP3O15049 544 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 USO1O60763 962 aaKnown RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 PRPF6O94906 941 aaKnown RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 GCNT3O95395 438 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 GGPS1O95749 300 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 MAPTP10636 758 aaKnown RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 NMT1P30419 496 aaKnown RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 NPEPPSP55786 919 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 FKBP3Q00688 224 aaKnown RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 PRKCEQ02156 737 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 LY6KQ17RY6 165 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 KNOP1Q1ED39 458 aaKnown RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 EDRF1Q3B7T1 1238 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 SPECC1LQ69YQ0 1117 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 ZNF720Q7Z2F6 126 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 PLEKHH3Q7Z736 793 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 CCDC150Q8NCX0 1101 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 CEP63Q96MT8 703 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 CCDC43Q96MW1 224 aaKnown RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 STRA6Q9BX79 667 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 GPBP1L1Q9HC44 474 aaPredicted RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 ZNF302Q9NR11 478 aa16.05■□□□□ 0.16
TRIM23-202ENST00000274327 DIS3Q9Y2L1 958 aaKnown RBP16.05■□□□□ 0.16
TRIM23-202ENST00000274327 ATP4AP20648 1035 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 INHBEP58166 350 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 LRMPQ12912 555 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 XKR3Q5GH77 459 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 CELF3Q5SZQ8 465 aaKnown RBP16.04■□□□□ 0.16
TRIM23-202ENST00000274327 ARMCX5Q6P1M9 558 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 IFNL1Q8IU54 200 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 FAM178BQ8IXR5 827 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 PCYT2Q99447 389 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 SH2D3AQ9BRG2 576 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 TUBGCP2Q9BSJ2 902 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 CPA4Q9UI42 421 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 ITIH6Q6UXX5 1313 aa16.04■□□□□ 0.16
TRIM23-202ENST00000274327 LGALS16A8MUM7 142 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 PDXKO00764 312 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 PPP1R37O75864 691 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 TAF1CQ15572 869 aaPredicted RBP16.03■□□□□ 0.16
TRIM23-202ENST00000274327 ODR4Q5SWX8 454 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 MAMDC4Q6UXC1 1216 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 SMC1BQ8NDV3 1235 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 AFAP1L1Q8TED9 768 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 SEPT1Q8WYJ6 367 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 CEP170P1Q96L14 293 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 KATNBL1Q9H079 304 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 VTA1Q9NP79 307 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 PDLIM7Q9NR12 457 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 TYW1Q9NV66 732 aaKnown RBP16.03■□□□□ 0.16
TRIM23-202ENST00000274327 ZMYM2Q9UBW7 1377 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 RBM47A0AV96 593 aaKnown RBP16.03■□□□□ 0.16
TRIM23-202ENST00000274327 SLC15A5A6NIM6 579 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 PLS3P13797 630 aa16.03■□□□□ 0.16
TRIM23-202ENST00000274327 STXBP4Q6ZWJ1 553 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms