RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SMIM5Q71RC9 77 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 NUDCD1Q96RS6 583 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 ZMYND12Q9H0C1 365 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 ATP7BP35670 1465 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 CEP170Q5SW79 1584 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 MYL3P08590 195 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 CDC27P30260 824 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 PRCPP42785 496 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 RWDD2BP57060 319 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 TBC1D9BQ66K14 1250 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 MAML1Q92585 1016 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 Q9H521 79 aa12.33□□□□□ -0.44
USP53-201ENST00000274030 SUDS3Q9H7L9 328 aaPredicted RBP12.33□□□□□ -0.44
USP53-201ENST00000274030 MAGI3Q5TCQ9 1506 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 ANKRD65E5RJM6 399 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 GOLGA8MH3BSY2 632 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 PPP1R12AO14974 1030 aaPredicted RBP12.32□□□□□ -0.44
USP53-201ENST00000274030 PRR29P0C7W0 189 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 FAM213AQ9BRX8 229 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 CD209Q9NNX6 404 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 ADAM22Q9P0K1 906 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 MGEA5O60502 916 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 STAT3P40763 770 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 GFPT1Q06210 699 aaPredicted RBP12.32□□□□□ -0.44
USP53-201ENST00000274030 ZNF667Q5HYK9 610 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 CLDN3O15551 220 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 PFKFB3Q16875 520 aaPredicted RBP12.32□□□□□ -0.44
USP53-201ENST00000274030 UNC13DQ70J99 1090 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 ARMCX2Q7L311 632 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 DYDC2Q96IM9 177 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 WRNIP1Q96S55 665 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 SLITRK6Q9H5Y7 841 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 RRP15Q9Y3B9 282 aaKnown RBP12.32□□□□□ -0.44
USP53-201ENST00000274030 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 TRPA1O75762 1119 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 PMLP29590 882 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 SLC8A1P32418 973 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 HABP4Q5JVS0 413 aaKnown RBP12.32□□□□□ -0.44
USP53-201ENST00000274030 PADI6Q6TGC4 694 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 PDIK1LQ8N165 341 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 DCP1AQ9NPI6 582 aaPredicted RBP12.32□□□□□ -0.44
USP53-201ENST00000274030 CNOT8Q9UFF9 292 aaKnown RBP12.32□□□□□ -0.44
USP53-201ENST00000274030 PPP1R9AQ9ULJ8 1098 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 HEY1Q9Y5J3 304 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 CCDC151A5D8V7 595 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 LRRC53A6NM62 1247 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 PI4K2BG5E9Z4 385 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 RPS6KA4O75676 772 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 NR1D1P20393 614 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 SNRNP48Q6IEG0 339 aaKnown RBP12.32□□□□□ -0.44
USP53-201ENST00000274030 ZNF746Q6NUN9 644 aaPredicted RBP12.32□□□□□ -0.44
USP53-201ENST00000274030 GSPT2Q8IYD1 628 aaKnown RBP12.32□□□□□ -0.44
USP53-201ENST00000274030 FAM81BQ96LP2 452 aa12.32□□□□□ -0.44
USP53-201ENST00000274030 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 NR3C1P04150 777 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 ANXA13P27216 316 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 SSTR3P32745 418 aaPredicted RBP12.31□□□□□ -0.44
USP53-201ENST00000274030 SOX5P35711 763 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 HDLBPQ00341 1268 aaKnown RBP12.31□□□□□ -0.44
USP53-201ENST00000274030 TXNRD1Q16881 649 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 FBXO38Q6PIJ6 1188 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 POTEGQ6S5H5 508 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 POTEEQ6S8J3 1075 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 TMEM270Q6UE05 265 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 HIPK4Q8NE63 616 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 RNF217Q8TC41 542 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 FAF2Q96CS3 445 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 OLA1Q9NTK5 396 aaKnown RBP12.31□□□□□ -0.44
USP53-201ENST00000274030 TTC7AQ9ULT0 858 aaPredicted RBP12.31□□□□□ -0.44
USP53-201ENST00000274030 ZNF211Q13398 564 aaPredicted RBP12.31□□□□□ -0.44
USP53-201ENST00000274030 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
USP53-201ENST00000274030 CXorf38Q8TB03 319 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 KDM5DQ9BY66 1539 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 ANKARQ7Z5J8 1434 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
USP53-201ENST00000274030 RTKN2Q8IZC4 609 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 SAYSD1Q9NPB0 183 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 NUGGCQ68CJ6 796 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 RNF14Q9UBS8 474 aa12.31□□□□□ -0.44
USP53-201ENST00000274030 NEO1Q92859 1461 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 C11orf70Q9BRQ4 267 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 ECE2O60344 883 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 KCNH2Q12809 1159 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 SPP2Q13103 211 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 CLEC4GQ6UXB4 293 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 TRIM67Q6ZTA4 783 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 TTC30BQ8N4P2 665 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 TTC17Q96AE7 1141 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 LY9Q9HBG7 655 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 HSPA6P17066 643 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 ELF1P32519 619 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 SLFN12LQ6IEE8 588 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 CENPUQ71F23 418 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 BRINP3Q76B58 766 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 LCA5Q86VQ0 697 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 SCN4BQ8IWT1 228 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 ZNF710Q8N1W2 664 aa12.3□□□□□ -0.44
USP53-201ENST00000274030 RNF25Q96BH1 459 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms