RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 GALNT8Q9NY28 637 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 DDX5P17844 614 aaKnown RBP16.84■□□□□ 0.29
UBR3-201ENST00000272793 EIF2S3P41091 472 aaKnown RBP16.84■□□□□ 0.29
UBR3-201ENST00000272793 PMS2P54278 862 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 ZNF445P59923 1031 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 ARMCX5Q6P1M9 558 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 RASSF3Q86WH2 238 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 GYS2P54840 703 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 CDO1Q16878 200 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 COG1Q8WTW3 980 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 GID8Q9NWU2 228 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 DNALI1O14645 258 aaPredicted RBP16.83■□□□□ 0.29
UBR3-201ENST00000272793 SNPHO15079 494 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 RPS6P62753 249 aaKnown RBP16.83■□□□□ 0.29
UBR3-201ENST00000272793 RHBDL2Q9NX52 303 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 VPS54Q9P1Q0 977 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 SERTAD1Q9UHV2 236 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 DTNAQ9Y4J8 743 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 GOLGA8JA6NMD2 632 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 LRRN2O75325 713 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 GOLGA8HP0CJ92 632 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 PAPOLAP51003 745 aaKnown RBP16.83■□□□□ 0.29
UBR3-201ENST00000272793 CUL4AQ13619 759 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 NSMFQ6X4W1 530 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 NEK8Q86SG6 692 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 ANKLE2Q86XL3 938 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 NUP93Q8N1F7 819 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 CMTR1Q8N1G2 835 aaKnown RBP16.83■□□□□ 0.29
UBR3-201ENST00000272793 TTC8Q8TAM2 541 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 ELAC2Q9BQ52 826 aaKnown RBP16.83■□□□□ 0.29
UBR3-201ENST00000272793 TMEM63CQ9P1W3 806 aa16.83■□□□□ 0.29
UBR3-201ENST00000272793 MYO9BQ13459 2157 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 CIITAP33076 1130 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 LRRC4Q9HBW1 653 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 ATP8B3O60423 1300 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 TECP42680 631 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.83■□□□□ 0.28
UBR3-201ENST00000272793 MYH7P12883 1935 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 HFM1A2PYH4 1435 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 TBC1D12O60347 775 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 CUL1Q13616 776 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 SPARCL1Q14515 664 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 C8orf58Q8NAV2 365 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 EXOSC4Q9NPD3 245 aaKnown RBP16.83■□□□□ 0.28
UBR3-201ENST00000272793 NDFIP2Q9NV92 336 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 MYL7Q01449 175 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 USP28Q96RU2 1077 aa16.83■□□□□ 0.28
UBR3-201ENST00000272793 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 NDUFA5Q16718 116 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 PCDHA5Q9Y5H7 936 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 SOX6P35712 828 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 GUCA1AP43080 201 aaPredicted RBP16.82■□□□□ 0.28
UBR3-201ENST00000272793 EPM2AIP1Q7L775 607 aaPredicted RBP16.82■□□□□ 0.28
UBR3-201ENST00000272793 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.82■□□□□ 0.28
UBR3-201ENST00000272793 C9orf84Q5VXU9 1444 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 ELF1P32519 619 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 ZNF827Q17R98 1081 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 USP39Q53GS9 565 aaKnown RBP16.82■□□□□ 0.28
UBR3-201ENST00000272793 XKR9Q5GH70 373 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 TTC6Q86TZ1 520 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 TCP1P17987 556 aaKnown RBP16.82■□□□□ 0.28
UBR3-201ENST00000272793 ITGA3P26006 1051 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 GADL1Q6ZQY3 521 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 GOLGA8SH3BPF8 625 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 MAPKAPK2P49137 400 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 TTC23LQ6PF05 361 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 TARSL2A2RTX5 802 aaKnown RBP16.82■□□□□ 0.28
UBR3-201ENST00000272793 RSPH10B2B2RC85 870 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 RSPH10BP0C881 870 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 OSBPP22059 807 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 ALDH6A1Q02252 535 aaKnown RBP16.82■□□□□ 0.28
UBR3-201ENST00000272793 RBBP4Q09028 425 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 BEND6Q5SZJ8 279 aaPredicted RBP16.82■□□□□ 0.28
UBR3-201ENST00000272793 VN1R5Q7Z5H4 357 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 OR8H2Q8N162 312 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 C19orf18Q8NEA5 215 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 AGR3Q8TD06 166 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 EPN3Q9H201 632 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 MAP10Q9P2G4 905 aa16.82■□□□□ 0.28
UBR3-201ENST00000272793 SMAPO00193 183 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 FYNP06241 537 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 VPS39Q96JC1 886 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 TMEM60Q9H2L4 133 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 NDUFB9Q9Y6M9 179 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 TTC41PQ6P2S7 1318 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 SCGNO76038 276 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 SMARCA1P28370 1054 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 FAF2Q96CS3 445 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 SLC13A1Q9BZW2 595 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 ANGEL1Q9UNK9 670 aaKnown RBP16.81■□□□□ 0.28
UBR3-201ENST00000272793 CA4P22748 312 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 CHRNA2Q15822 529 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 PI4K2BQ8TCG2 481 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 SEPT9Q9UHD8 586 aaPredicted RBP16.81■□□□□ 0.28
UBR3-201ENST00000272793 LRRC36Q1X8D7 754 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 ACCSLQ4AC99 568 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 MFN1Q8IWA4 741 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 PPP1R13BQ96KQ4 1090 aa16.81■□□□□ 0.28
UBR3-201ENST00000272793 KLHL25Q9H0H3 589 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms