RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 EDRF1Q3B7T1 1238 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 RGMBQ6NW40 437 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 OTUD6AQ7L8S5 288 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 CEP63Q96MT8 703 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 VPS16Q9H269 839 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 DDX41Q9UJV9 622 aaKnown RBP18.09■□□□□ 0.49
TPM1-201ENST00000267996 TRAF3IP3Q9Y228 551 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 MAFBQ9Y5Q3 323 aaPredicted RBP18.09■□□□□ 0.49
TPM1-201ENST00000267996 ITIH6Q6UXX5 1313 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 MAPTP10636 758 aaKnown RBP18.09■□□□□ 0.49
TPM1-201ENST00000267996 ADORA2AP29274 412 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 PTPN21Q16825 1174 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 CCDC62Q6P9F0 684 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 METTL7BQ6UX53 244 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 ZNF720Q7Z2F6 126 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 ZNF467Q7Z7K2 595 aaPredicted RBP18.09■□□□□ 0.49
TPM1-201ENST00000267996 NELFCDQ8IXH7 590 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 TUBGCP2Q9BSJ2 902 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 STRA6Q9BX79 667 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 UBE4BO95155 1302 aa18.08■□□□□ 0.49
TPM1-201ENST00000267996 MCM3APO60318 1980 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 MYH11P35749 1972 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 GSTTP1A0A1W2PQM5 241 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 TMEM150BA6NC51 233 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 IGF2BP3O00425 579 aaKnown RBP eCLIP18.08■□□□□ 0.48
TPM1-201ENST00000267996 PDXKO00764 312 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 PRPF6O94906 941 aaKnown RBP18.08■□□□□ 0.48
TPM1-201ENST00000267996 ARIH2O95376 493 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 SLC10A3P09131 477 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 XKR9Q5GH70 373 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 UTP14CQ5TAP6 766 aaKnown RBP18.08■□□□□ 0.48
TPM1-201ENST00000267996 KIAA1524Q8TCG1 905 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 PYCARDQ9ULZ3 195 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 PLXNA1Q9UIW2 1896 aa18.08■□□□□ 0.48
TPM1-201ENST00000267996 USO1O60763 962 aaKnown RBP18.07■□□□□ 0.48
TPM1-201ENST00000267996 PPP1R37O75864 691 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 GCNT3O95395 438 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 NMT1P30419 496 aaKnown RBP18.07■□□□□ 0.48
TPM1-201ENST00000267996 NPEPPSP55786 919 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 CCZ1BP86790 482 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 CCZ1P86791 482 aaPredicted RBP18.07■□□□□ 0.48
TPM1-201ENST00000267996 PRKCEQ02156 737 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 SP4Q02446 784 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 GRB14Q14449 540 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 XKR3Q5GH77 459 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 ODR4Q5SWX8 454 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 PLA2G4FQ68DD2 849 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 EEPD1Q7L9B9 569 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 FAM178BQ8IXR5 827 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 EEF2KMTQ96G04 330 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 CCDC43Q96MW1 224 aaKnown RBP18.07■□□□□ 0.48
TPM1-201ENST00000267996 TLL2Q9Y6L7 1015 aa18.07■□□□□ 0.48
TPM1-201ENST00000267996 MYH9P35579 1960 aaKnown RBP18.07■□□□□ 0.48
TPM1-201ENST00000267996 A0A1W2PQC6 194 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 GGPS1O95749 300 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 ATP4AP20648 1035 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 SFPQP23246 707 aaKnown RBP eCLIP18.06■□□□□ 0.48
TPM1-201ENST00000267996 MAPK4P31152 587 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 MARSP56192 900 aaKnown RBP18.06■□□□□ 0.48
TPM1-201ENST00000267996 LY6KQ17RY6 165 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 MIIPQ5JXC2 388 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 ARMCX2Q7L311 632 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 GPR142Q7Z601 462 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 PCYT2Q99447 389 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 ZNF302Q9NR11 478 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 PDLIM7Q9NR12 457 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 TYW1Q9NV66 732 aaKnown RBP18.06■□□□□ 0.48
TPM1-201ENST00000267996 LARSQ9P2J5 1176 aaKnown RBP18.06■□□□□ 0.48
TPM1-201ENST00000267996 DIS3Q9Y2L1 958 aaKnown RBP18.06■□□□□ 0.48
TPM1-201ENST00000267996 IVNS1ABPQ9Y6Y0 642 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 ARID2Q68CP9 1835 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 SORBS3O60504 671 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 GNA14O95837 355 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 PLS3P13797 630 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 MTIF2P46199 727 aaKnown RBP18.06■□□□□ 0.48
TPM1-201ENST00000267996 DNM2P50570 870 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 INHBEP58166 350 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 NFIL3Q16649 462 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 CELF3Q5SZQ8 465 aaKnown RBP18.06■□□□□ 0.48
TPM1-201ENST00000267996 STXBP4Q6ZWJ1 553 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 CREBRFQ8IUR6 639 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 FBXO16Q8IX29 292 aaPredicted RBP18.06■□□□□ 0.48
TPM1-201ENST00000267996 AFAP1L1Q8TED9 768 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 SEPT1Q8WYJ6 367 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 DRC1Q96MC2 740 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 ST6GALNAC4Q9H4F1 302 aa18.06■□□□□ 0.48
TPM1-201ENST00000267996 ZNF236Q9UL36 1845 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 ZMYM2Q9UBW7 1377 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 FAM155AB1AL88 458 aaPredicted RBP18.05■□□□□ 0.48
TPM1-201ENST00000267996 CLCN1P35523 988 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 UBXN1Q04323 297 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 ALCAMQ13740 583 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 MAMDC4Q6UXC1 1216 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 PLEKHH3Q7Z736 793 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 CEP170P1Q96L14 293 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 SH2D3AQ9BRG2 576 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 TMX1Q9H3N1 280 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 PCDHB13Q9Y5F0 798 aa18.05■□□□□ 0.48
TPM1-201ENST00000267996 RBM47A0AV96 593 aaKnown RBP18.04■□□□□ 0.48
TPM1-201ENST00000267996 KIF3CO14782 793 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms