RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ICA1Q05084 483 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 EXOC3L4Q17RC7 722 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 ACCSLQ4AC99 568 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 BIN2Q9UBW5 565 aaPredicted RBP13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 MTRF1LQ9UGC7 380 aaKnown RBP13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 HDAC9Q9UKV0 1011 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 STX8Q9UNK0 236 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 ROBO3Q96MS0 1386 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 FRMD3A2A2Y4 597 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 FGGP02679 453 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 FERP16591 822 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 GRIK3Q13003 919 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 CARD9Q9H257 536 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 HOMER3Q9NSC5 361 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 EMILIN3Q9NT22 766 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 ARMCX3Q9UH62 379 aaPredicted RBP13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 BCL9O00512 1426 aa13.45□□□□□ -0.26
CHMP2B-201ENST00000263780 USP17L3A6NCW0 530 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 USP17L4A6NCW7 530 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 MARCH6O60337 910 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 SUN1O94901 812 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 PPARDQ03181 441 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 USP17L1Q7RTZ2 530 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 GLIS3Q8NEA6 775 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 ATP8B4Q8TF62 1192 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 THOC1Q96FV9 657 aaKnown RBP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 NAP1L4Q99733 375 aaKnown RBP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 MXD3Q9BW11 206 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 CELF4Q9BZC1 486 aaKnown RBP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 ZDHHC18Q9NUE0 388 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 NENFQ9UMX5 172 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 MTMR7Q9Y216 660 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 MYH7BA7E2Y1 1941 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 TLDC2A0PJX2 215 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 GCKP35557 465 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 ADCY7P51828 1080 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 FAM133BQ5BKY9 247 aaKnown RBP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 HERC4Q5GLZ8 1057 aaPredicted RBP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 KIAA1755Q5JYT7 1200 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 HYIQ5T013 277 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 BZW1Q7L1Q6 419 aaKnown RBP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 DZIP1Q86YF9 867 aaKnown RBP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 NELFCDQ8IXH7 590 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 TAOK3Q9H2K8 898 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 KCTD10Q9H3F6 313 aa13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 METTL14Q9HCE5 456 aaKnown RBP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 SPATS2LQ9NUQ6 558 aaKnown RBP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 NIP7Q9Y221 180 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 USP15Q9Y4E8 981 aaPredicted RBP13.44□□□□□ -0.26
CHMP2B-201ENST00000263780 SPDYE3A6NKU9 549 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 PODXLO00592 558 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 SNX3O60493 162 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 LMNB1P20700 586 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 HIBADHP31937 336 aaKnown RBP13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 LACTBP83111 547 aaPredicted RBP13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 PROCA1Q8NCQ7 364 aaPredicted RBP13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 SPDL1Q96EA4 605 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 RUNDC3BQ96NL0 473 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 PRMT1Q99873 361 aaKnown RBP13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 ROPN1BQ9BZX4 212 aaPredicted RBP13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 TRIM31Q9BZY9 425 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 GOLPH3Q9H4A6 298 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 AZI2Q9H6S1 392 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 ROPN1Q9HAT0 212 aaPredicted RBP13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 MINPP1Q9UNW1 487 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 SLIT2O94813 1529 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 POTEMA6NI47 508 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 O00370 1275 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 GOLGA8HP0CJ92 632 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 ATP11AP98196 1134 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 MAP2K1Q02750 393 aaPredicted RBP13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 C11orf91Q3C1V1 193 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 AGAP11Q8TF27 550 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 RFFLQ8WZ73 363 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 SAAL1Q96ER3 474 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 TRIM51Q9BSJ1 452 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 ADAM7Q9H2U9 754 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 ECT2Q9H8V3 914 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 SLC24A3Q9HC58 644 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 KCNMB3Q9NPA1 279 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 PCDHA2Q9Y5H9 948 aa13.43□□□□□ -0.26
CHMP2B-201ENST00000263780 XRCC5P13010 732 aaKnown RBP13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 NR2F2P24468 414 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 PON1P27169 355 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 COPS2P61201 443 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 KLRC3Q07444 240 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 SF3B3Q15393 1217 aaKnown RBP13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 GALNTL6Q49A17 601 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 CAPRIN2Q6IMN6 1127 aaKnown RBP13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 KCNK18Q7Z418 384 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 SCFD1Q8WVM8 642 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 CNKSR1Q969H4 720 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 DYNLL2Q96FJ2 89 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 TRIM7Q9C029 511 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 CORO1CQ9ULV4 474 aaPredicted RBP13.42□□□□□ -0.26
CHMP2B-201ENST00000263780 ZNF652Q9Y2D9 606 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms