RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 CELF1Q92879 486 aaKnown RBP11.57□□□□□ -0.56
CD44-201ENST00000263398 USP17L15C9J2P7 530 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 USP17L13C9JLJ4 530 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 USP17L11C9JVI0 530 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 USP17L18D6R9N7 530 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 USP17L22D6RA61 530 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 USP17L17D6RBQ6 530 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 USP17L19D6RCP7 530 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 USP17L20D6RJB6 530 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 RPSAP08865 295 aaKnown RBP11.57□□□□□ -0.56
CD44-201ENST00000263398 MAGEA9P43362 315 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 CCNA1P78396 465 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 GFPT1Q06210 699 aaPredicted RBP11.57□□□□□ -0.56
CD44-201ENST00000263398 USP17L24Q0WX57 530 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 USP17L6PQ6QN14 398 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 CCNYQ8ND76 341 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 PYROXD1Q8WU10 500 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 FBXO2Q9UK22 296 aaPredicted RBP11.57□□□□□ -0.56
CD44-201ENST00000263398 AKT3Q9Y243 479 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 CPDO75976 1380 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 NBPF26B4DH59 902 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 TADA3O75528 432 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 LDHAP00338 332 aaKnown RBP11.57□□□□□ -0.56
CD44-201ENST00000263398 CYP19A1P11511 503 aaPredicted RBP11.57□□□□□ -0.56
CD44-201ENST00000263398 CD58P19256 250 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 GGCXP38435 758 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 GPC5P78333 572 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 NBPF10Q6P3W6 841 aaKnown RBP11.57□□□□□ -0.56
CD44-201ENST00000263398 NBPF15Q8N660 670 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 KCTD6Q8NC69 237 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 DCPSQ96C86 337 aaKnown RBP11.57□□□□□ -0.56
CD44-201ENST00000263398 RPS6KC1Q96S38 1066 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 SEL1LQ9UBV2 794 aa11.57□□□□□ -0.56
CD44-201ENST00000263398 CNOT8Q9UFF9 292 aaKnown RBP11.57□□□□□ -0.56
CD44-201ENST00000263398 PRPSAP2O60256 369 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 SRGAP2BP0DMP2 458 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 CNGA1P29973 690 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 SUPT20HL1Q3ZLR7 823 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 RAPH1Q70E73 1250 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 DNAAF3Q8N9W5 541 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 MCPH1Q8NEM0 835 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 NLRP7Q8WX94 980 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 ANAPC7Q9UJX3 599 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 MUM1L1Q5H9M0 696 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 OR6B2Q6IFH4 312 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 BRINP3Q76B58 766 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 CCSER1Q9C0I3 900 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 SLC38A10Q9HBR0 1119 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 ZCCHC17Q9NP64 241 aaKnown RBP11.56□□□□□ -0.56
CD44-201ENST00000263398 ADAM22Q9P0K1 906 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 CAPN11Q9UMQ6 739 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 CRB1P82279 1406 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 POTEB3A0JP26 581 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 GRID2IPA4D2P6 1211 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 PP2D1A8MPX8 630 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 POTECB2RU33 542 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 RAD17O75943 681 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 NAALADL2Q58DX5 795 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 POTEBQ6S5H4 581 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 TADA2BQ86TJ2 420 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 ERICH1Q86X53 443 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 NEDD1Q8NHV4 660 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 GPR101Q96P66 508 aaPredicted RBP11.56□□□□□ -0.56
CD44-201ENST00000263398 WDR24Q96S15 920 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 APOL6Q9BWW8 343 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 KIAA1586Q9HCI6 787 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 NRKQ7Z2Y5 1582 aa11.56□□□□□ -0.56
CD44-201ENST00000263398 OATP04181 439 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 MMEP08473 750 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 JAK3P52333 1124 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 HSP90AA5PQ58FG0 334 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 E4F1Q66K89 784 aaPredicted RBP11.55□□□□□ -0.56
CD44-201ENST00000263398 DPY19L2Q6NUT2 758 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 NFRKBQ6P4R8 1299 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 C7orf31Q8N865 590 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 DPF2Q92785 391 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 ELAC2Q9BQ52 826 aaKnown RBP11.55□□□□□ -0.56
CD44-201ENST00000263398 TJP3O95049 919 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 ABL1P00519 1130 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 PRELPP51888 382 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 IFRD2Q12894 506 aaPredicted RBP11.55□□□□□ -0.56
CD44-201ENST00000263398 PCGF5Q86SE9 256 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 GDAP1Q8TB36 358 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 FBXO41Q8TF61 875 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 COG1Q8WTW3 980 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 MSTO1Q9BUK6 570 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 SNX25Q9H3E2 840 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 SMYD2Q9NRG4 433 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 LIMA1Q9UHB6 759 aaKnown RBP11.55□□□□□ -0.56
CD44-201ENST00000263398 PPP1R9AQ9ULJ8 1098 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 IQANK1A0A1B0GTG1 560 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 A0A1B0GTH6 734 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 MAPK13O15264 365 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 PEX19P40855 299 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 GCLMP48507 274 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 CCZ1BP86790 482 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 CCZ1P86791 482 aaPredicted RBP11.55□□□□□ -0.56
CD44-201ENST00000263398 PADI6Q6TGC4 694 aa11.55□□□□□ -0.56
CD44-201ENST00000263398 RSRC2Q7L4I2 434 aaKnown RBP11.55□□□□□ -0.56
CD44-201ENST00000263398 TMEM35BQ8NCS4 154 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms