RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 GAKO14976 1311 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 COL24A1Q17RW2 1714 aa18.06■□□□□ 0.48
ZNF541-201ENST00000263351 GCNT3O95395 438 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 TRIM49P0CI25 452 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 TRIM49CP0CI26 452 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 MRPL12P52815 198 aaKnown RBP18.05■□□□□ 0.48
ZNF541-201ENST00000263351 CTTNQ14247 550 aaKnown RBP18.05■□□□□ 0.48
ZNF541-201ENST00000263351 PLS1Q14651 629 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 TRAPPC3LQ5T215 181 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 PEX26Q7Z412 305 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 SYN2Q92777 582 aaPredicted RBP18.05■□□□□ 0.48
ZNF541-201ENST00000263351 EDEM3Q9BZQ6 932 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 ISCUQ9H1K1 167 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 TSKSQ9UJT2 592 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 GDF11O95390 407 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 AFPP02771 609 aaKnown RBP18.05■□□□□ 0.48
ZNF541-201ENST00000263351 MNAT1P51948 309 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 TNNC1P63316 161 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 EPHA7Q15375 998 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 BARGINQ6ZT62 677 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 TRMT1LQ7Z2T5 733 aaKnown RBP18.05■□□□□ 0.48
ZNF541-201ENST00000263351 SLC35C1Q96A29 364 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 ARHGEF26Q96DR7 871 aa18.05■□□□□ 0.48
ZNF541-201ENST00000263351 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.04■□□□□ 0.48
ZNF541-201ENST00000263351 PHF20L1A8MW92 1017 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 UBAP1LF5GYI3 381 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 H0YHG0 523 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 MEFVO15553 781 aaPredicted RBP18.04■□□□□ 0.48
ZNF541-201ENST00000263351 SHBGP04278 402 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 XRCC5P13010 732 aaKnown RBP18.04■□□□□ 0.48
ZNF541-201ENST00000263351 SPICE1Q8N0Z3 855 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 SEPT11Q9NVA2 429 aaKnown RBP18.04■□□□□ 0.48
ZNF541-201ENST00000263351 TMOD4Q9NZQ9 345 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 BUB1BO60566 1050 aaPredicted RBP18.04■□□□□ 0.48
ZNF541-201ENST00000263351 FGGP02679 453 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 NR3C1P04150 777 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 EEF2P13639 858 aaKnown RBP18.04■□□□□ 0.48
ZNF541-201ENST00000263351 SMARCA1P28370 1054 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 GALCP54803 685 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 ARHGAP4P98171 946 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 KNOP1Q1ED39 458 aaKnown RBP18.04■□□□□ 0.48
ZNF541-201ENST00000263351 LENG9Q96B70 501 aa18.04■□□□□ 0.48
ZNF541-201ENST00000263351 TISP43B9A030 160 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 MARSP56192 900 aaKnown RBP18.03■□□□□ 0.48
ZNF541-201ENST00000263351 MAGOHP61326 146 aaKnown RBP18.03■□□□□ 0.48
ZNF541-201ENST00000263351 JAG1P78504 1218 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 ODF2Q5BJF6 829 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 MREGQ8N565 214 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 ETNPPLQ8TBG4 499 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 MAGOHBQ96A72 148 aaKnown RBP18.03■□□□□ 0.48
ZNF541-201ENST00000263351 NT5C3AQ9H0P0 336 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 ATP8A1Q9Y2Q0 1164 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 EVI5O60447 810 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 MARCKSL1P49006 195 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 DHX9Q08211 1270 aaKnown RBP18.03■□□□□ 0.48
ZNF541-201ENST00000263351 SF3B2Q13435 895 aaKnown RBP18.03■□□□□ 0.48
ZNF541-201ENST00000263351 HYIQ5T013 277 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 CDC42EP5Q6NZY7 148 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 GPATCH11Q8N954 259 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 BANK1Q8NDB2 785 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 WHAMMQ8TF30 809 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 CYFIP2Q96F07 1278 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 ACP6Q9NPH0 428 aa18.03■□□□□ 0.48
ZNF541-201ENST00000263351 PGRMC1O00264 195 aaKnown RBP18.02■□□□□ 0.48
ZNF541-201ENST00000263351 GUCY2CP25092 1073 aa18.02■□□□□ 0.48
ZNF541-201ENST00000263351 ARHGAP44Q17R89 818 aa18.02■□□□□ 0.48
ZNF541-201ENST00000263351 CBWD6Q4V339 395 aa18.02■□□□□ 0.48
ZNF541-201ENST00000263351 CBWD3Q5JTY5 395 aa18.02■□□□□ 0.48
ZNF541-201ENST00000263351 CBWD5Q5RIA9 395 aa18.02■□□□□ 0.48
ZNF541-201ENST00000263351 MAEAQ7L5Y9 396 aa18.02■□□□□ 0.48
ZNF541-201ENST00000263351 NT5DC3Q86UY8 548 aa18.02■□□□□ 0.48
ZNF541-201ENST00000263351 SH2D3AQ9BRG2 576 aa18.02■□□□□ 0.48
ZNF541-201ENST00000263351 MTFR1LQ9H019 292 aa18.02■□□□□ 0.48
ZNF541-201ENST00000263351 SLC12A6Q9UHW9 1150 aa18.02■□□□□ 0.48
ZNF541-201ENST00000263351 FRMD3A2A2Y4 597 aa18.02■□□□□ 0.47
ZNF541-201ENST00000263351 DDTLA6NHG4 134 aaPredicted RBP18.02■□□□□ 0.47
ZNF541-201ENST00000263351 GCOM1H8Y6P7 765 aaPredicted RBP18.02■□□□□ 0.47
ZNF541-201ENST00000263351 TGFB1I1O43294 461 aa18.02■□□□□ 0.47
ZNF541-201ENST00000263351 MYZAPP0CAP1 466 aa18.02■□□□□ 0.47
ZNF541-201ENST00000263351 PLCG2P16885 1265 aa18.02■□□□□ 0.47
ZNF541-201ENST00000263351 IKQ13123 557 aaPredicted RBP18.02■□□□□ 0.47
ZNF541-201ENST00000263351 ORC2Q13416 577 aaPredicted RBP18.02■□□□□ 0.47
ZNF541-201ENST00000263351 SEPT2Q15019 361 aa18.02■□□□□ 0.47
ZNF541-201ENST00000263351 RUBCNQ92622 972 aa18.02■□□□□ 0.47
ZNF541-201ENST00000263351 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.02■□□□□ 0.47
ZNF541-201ENST00000263351 PLCB1Q9NQ66 1216 aa18.02■□□□□ 0.47
ZNF541-201ENST00000263351 KIAA0754O94854 1291 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 CYP2J2P51589 502 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 NGLY1Q96IV0 654 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 LRRC27Q9C0I9 530 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 NUCKS1Q9H1E3 243 aaKnown RBP18.01■□□□□ 0.47
ZNF541-201ENST00000263351 RNF14Q9UBS8 474 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 DDX20Q9UHI6 824 aaKnown RBP18.01■□□□□ 0.47
ZNF541-201ENST00000263351 KDM3AQ9Y4C1 1321 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 TMEM110-MUSTN1A8MSY1 372 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 FOXO6A8MYZ6 492 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 MSH4O15457 936 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 SERPINB2P05120 415 aa18.01■□□□□ 0.47
ZNF541-201ENST00000263351 BYSLQ13895 437 aaKnown RBP18.01■□□□□ 0.47
ZNF541-201ENST00000263351 RC3H1Q5TC82 1133 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms