RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 NOC3LQ8WTT2 800 aaKnown RBP25.35■■□□□ 1.65
SMARCB1-201ENST00000263121 TINF2Q9BSI4 451 aa25.35■■□□□ 1.65
SMARCB1-201ENST00000263121 SFI1A8K8P3 1242 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 CBFA2T2O43439 604 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 USO1O60763 962 aaKnown RBP25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 KIF20AO95235 890 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 HOXC6P09630 235 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 ATP4AP20648 1035 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 CASP5P51878 434 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 UBASH3AP57075 661 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 LRRC63Q05C16 580 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 XKR3Q5GH77 459 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 AFAP1L1Q8TED9 768 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 USP6NLQ92738 828 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 GPR20Q99678 358 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 SH2D3AQ9BRG2 576 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 THAP9Q9H5L6 903 aa25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 MYH9P35579 1960 aaKnown RBP25.34■■□□□ 1.65
SMARCB1-201ENST00000263121 ZCWPW2Q504Y3 356 aa25.33■■□□□ 1.65
SMARCB1-201ENST00000263121 TMEM63BQ5T3F8 832 aa25.33■■□□□ 1.65
SMARCB1-201ENST00000263121 IRF2BP1Q8IU81 584 aa25.33■■□□□ 1.65
SMARCB1-201ENST00000263121 DHX37Q8IY37 1157 aaKnown RBP25.33■■□□□ 1.65
SMARCB1-201ENST00000263121 MYCT1Q8N699 235 aa25.33■■□□□ 1.65
SMARCB1-201ENST00000263121 COPS5Q92905 334 aa25.33■■□□□ 1.65
SMARCB1-201ENST00000263121 NAP1L5Q96NT1 182 aaPredicted RBP25.33■■□□□ 1.65
SMARCB1-201ENST00000263121 FIZ1Q96SL8 496 aa25.33■■□□□ 1.65
SMARCB1-201ENST00000263121 CREBZFQ9NS37 354 aa25.33■■□□□ 1.65
SMARCB1-201ENST00000263121 ALDH1A1P00352 501 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 TCF7P36402 384 aaPredicted RBP25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 SPAG1Q07617 926 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 BMT2Q1RMZ1 405 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 HSDL1Q3SXM5 330 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 CSGALNACT2Q8N6G5 542 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 SRRTQ9BXP5 876 aaKnown RBP25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 MRPL44Q9H9J2 332 aaKnown RBP25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 SEPT9Q9UHD8 586 aaPredicted RBP25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 LGR5O75473 907 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 OATP04181 439 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 DEFB115Q30KQ5 88 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 FAM160B1Q5W0V3 765 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 TRMT1LQ7Z2T5 733 aaKnown RBP25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 SPC24Q8NBT2 197 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 CEP170P1Q96L14 293 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 KCTD10Q9H3F6 313 aa25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 LIMA1Q9UHB6 759 aaKnown RBP25.32■■□□□ 1.64
SMARCB1-201ENST00000263121 MYBP10242 640 aa25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 ARHGAP1Q07960 439 aa25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 HS1BP3Q53T59 392 aa25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 TCP11X2Q5H9J9 407 aa25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 ZNF784Q8NCA9 323 aaPredicted RBP25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 TRIM44Q96DX7 344 aaPredicted RBP25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 CAPNS2Q96L46 248 aa25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 SPATA33Q96N06 139 aa25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 ABHD16BQ9H3Z7 469 aa25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 CYP26B1Q9NR63 512 aa25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 INTS13Q9NVM9 706 aa25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 MYH11P35749 1972 aa25.31■■□□□ 1.64
SMARCB1-201ENST00000263121 LRRC10BA6NIK2 292 aa25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 KCNJ18B7U540 433 aa25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 NOP56O00567 594 aaKnown RBP25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 EIF3DO15371 548 aaKnown RBP eCLIP25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 AOC2O75106 756 aa25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 STAT5BP51692 787 aa25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 KCNJ12Q14500 433 aa25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 ZNF507Q8TCN5 953 aa25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 TSG101Q99816 390 aa25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 PDLIM7Q9NR12 457 aa25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 GJD2Q9UKL4 321 aa25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 DOCK3Q8IZD9 2030 aa25.3■■□□□ 1.64
SMARCB1-201ENST00000263121 A0A1B0GTH6 734 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 ECM2O94769 699 aaPredicted RBP25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 GCNT3O95395 438 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 PTMAP06454 111 aaKnown RBP25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 HOXD13P35453 343 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 APLP1P51693 650 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 ODR4Q5SWX8 454 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 MAEAQ7L5Y9 396 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 NELFCDQ8IXH7 590 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 FAM178BQ8IXR5 827 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 DRC7Q8IY82 874 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 REM2Q8IYK8 340 aaPredicted RBP25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 SOCS4Q8WXH5 440 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 DRC1Q96MC2 740 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 CTAGE1Q96RT6 745 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 NIFKQ9BYG3 293 aaKnown RBP25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 EMSYQ7Z589 1322 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 MGAMO43451 1857 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 GH1P01241 217 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 EEF1GP26641 437 aaKnown RBP25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 NMT1P30419 496 aaKnown RBP25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 ADCYAP1R1P41586 468 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 IRF5Q13568 498 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 ACVR2BQ13705 512 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 LAMC2Q13753 1193 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 KRT31Q15323 416 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 ZNF720Q7Z2F6 126 aa25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 EMID1Q96A84 441 aaPredicted RBP25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 LARSQ9P2J5 1176 aaKnown RBP25.29■■□□□ 1.64
SMARCB1-201ENST00000263121 UBE4BO95155 1302 aa25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 GOLGA6L6A8MZA4 724 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms