RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 UPF3BQ9BZI7 483 aaKnown RBP13.87□□□□□ -0.19
TRAF4-202ENST00000262396 ZMYND12Q9H0C1 365 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 GABBR1Q9UBS5 961 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 PCDHB12Q9Y5F1 795 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 PCDHA10Q9Y5I2 948 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 SNX14Q9Y5W7 946 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 SIP14410 1827 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 IGSF9BQ9UPX0 1349 aa13.87□□□□□ -0.19
TRAF4-202ENST00000262396 ESYT2A0FGR8 921 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 FAM86C2PA6NEL3 165 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 GRXCR2A6NFK2 248 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 TBKBP1A7MCY6 615 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 WDR64B1ANS9 1081 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 C5orf67F2Z3F1 127 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 CHMP2AO43633 222 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 ATG7O95352 703 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 CCNE2O96020 404 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 CYP3A4P08684 503 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 ZSCAN20P17040 1043 aaPredicted RBP13.86□□□□□ -0.19
TRAF4-202ENST00000262396 RPS6KB1P23443 525 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 SARSP49591 514 aaKnown RBP13.86□□□□□ -0.19
TRAF4-202ENST00000262396 SSRP1Q08945 709 aaKnown RBP13.86□□□□□ -0.19
TRAF4-202ENST00000262396 KIZQ2M2Z5 673 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 NAALADL2Q58DX5 795 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 ABI1Q8IZP0 508 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 BBXQ8WY36 941 aaPredicted RBP13.86□□□□□ -0.19
TRAF4-202ENST00000262396 FAM167AQ96KS9 214 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 POP1Q99575 1024 aaKnown RBP13.86□□□□□ -0.19
TRAF4-202ENST00000262396 ADAM2Q99965 735 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 ATP6V0A4Q9HBG4 840 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 C1orf112Q9NSG2 853 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 NRBP2Q9NSY0 501 aa13.86□□□□□ -0.19
TRAF4-202ENST00000262396 FAM217BQ9NTX9 383 aaPredicted RBP13.86□□□□□ -0.19
TRAF4-202ENST00000262396 MRPL42Q9Y6G3 142 aaKnown RBP13.86□□□□□ -0.19
TRAF4-202ENST00000262396 MAGEB2O15479 319 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 GAS7O60861 476 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 MMP1P03956 469 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 NEFLP07196 543 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 HSPA4P34932 840 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 FAM43BQ6ZT52 329 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-202ENST00000262396 THNSL1Q8IYQ7 743 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 NEK9Q8TD19 979 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 RASGRP4Q8TDF6 673 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 POF1BQ8WVV4 589 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 CLP1Q92989 425 aaKnown RBP13.85□□□□□ -0.19
TRAF4-202ENST00000262396 P2RX5Q93086 422 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-202ENST00000262396 OSMRQ99650 979 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 LRFN3Q9BTN0 628 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 TEKT3Q9BXF9 490 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 RNF26Q9BY78 433 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-202ENST00000262396 C22orf23Q9BZE7 217 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 VPS54Q9P1Q0 977 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 ST3GAL5Q9UNP4 418 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 PLAGL2Q9UPG8 496 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 NOC2LQ9Y3T9 749 aaKnown RBP13.85□□□□□ -0.19
TRAF4-202ENST00000262396 KDM3AQ9Y4C1 1321 aa13.85□□□□□ -0.19
TRAF4-202ENST00000262396 IGKV6D-21A0A0A0MT36 114 aa13.84□□□□□ -0.19
TRAF4-202ENST00000262396 MARCH6O60337 910 aa13.84□□□□□ -0.19
TRAF4-202ENST00000262396 VTNP04004 478 aa13.84□□□□□ -0.19
TRAF4-202ENST00000262396 CRYBB1P53674 252 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-202ENST00000262396 SLC24A5Q71RS6 500 aa13.84□□□□□ -0.19
TRAF4-202ENST00000262396 RBM23Q86U06 439 aaKnown RBP13.84□□□□□ -0.19
TRAF4-202ENST00000262396 RTN4RL1Q86UN2 441 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-202ENST00000262396 KIAA0319LQ8IZA0 1049 aa13.84□□□□□ -0.19
TRAF4-202ENST00000262396 KLHL23Q8NBE8 558 aa13.84□□□□□ -0.19
TRAF4-202ENST00000262396 RNF169Q8NCN4 708 aa13.84□□□□□ -0.19
TRAF4-202ENST00000262396 LINC01599Q8WXQ3 324 aa13.84□□□□□ -0.19
TRAF4-202ENST00000262396 CYP46A1Q9Y6A2 500 aa13.84□□□□□ -0.19
TRAF4-202ENST00000262396 TRANK1O15050 2925 aa13.84□□□□□ -0.19
TRAF4-202ENST00000262396 XIRP2A4UGR9 3374 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 PI4K2BG5E9Z4 385 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 CA8P35219 290 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 JAK3P52333 1124 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 HYAL1Q12794 435 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 LRCH2Q5VUJ6 765 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 EFCAB12Q6NXP0 572 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 NLRP7Q8WX94 980 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 NCOA5Q9HCD5 579 aaKnown RBP13.83□□□□□ -0.2
TRAF4-202ENST00000262396 ERVK-5Q9HDB9 667 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 DISC1Q9NRI5 854 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 PRKAG3Q9UGI9 489 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 PUF60Q9UHX1 559 aaKnown RBP13.83□□□□□ -0.2
TRAF4-202ENST00000262396 CD207Q9UJ71 328 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 MAFBQ9Y5Q3 323 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-202ENST00000262396 NCOR1O75376 2440 aa13.83□□□□□ -0.2
TRAF4-202ENST00000262396 IGLV3-22A0A075B6J6 115 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 DHX15O43143 795 aaKnown RBP13.82□□□□□ -0.2
TRAF4-202ENST00000262396 HOXA2O43364 376 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 DCXO43602 365 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 GPR37L1O60883 481 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 ITGB1P05556 798 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 SRGAP2BP0DMP2 458 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 IFNAR1P17181 557 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 SFNP31947 248 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 NRIP1P48552 1158 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 GATMP50440 423 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 CLCN3P51790 818 aa13.82□□□□□ -0.2
TRAF4-202ENST00000262396 NLRP11P59045 1033 aaKnown RBP13.82□□□□□ -0.2
TRAF4-202ENST00000262396 TBC1D8BQ0IIM8 1120 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms