RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 OAZ1P54368 228 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SNX17Q15036 470 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PGBD4Q96DM1 585 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CAPZA3Q96KX2 299 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PARK7Q99497 189 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 KLC2Q9H0B6 622 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 MINPP1Q9UNW1 487 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CCDC88AQ3V6T2 1871 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SPATA31A5Q5VU36 1347 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SPATA31A7Q8IWB4 1347 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 MYH6P13533 1939 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 USP17L10C9JJH3 530 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 K7ERI5 159 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PTH1RQ03431 593 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SREBF2Q12772 1141 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PNOCQ13519 176 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TAF11Q15544 211 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 MAPRE1Q15691 268 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 GPR162Q16538 588 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ZFP91Q96JP5 570 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ANKEF1Q9NU02 776 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 IP6K2Q9UHH9 426 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 BAG5Q9UL15 447 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ASAP1Q9ULH1 1129 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SH3BP5O60239 455 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ZC3H11AO75152 810 aaKnown RBP eCLIP4.64□□□□□ -1.673e-6■■■□□ 18.7
VPS13C-202ENST00000261517 CHEK2O96017 543 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CD4P01730 458 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TAC1P20366 129 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 MAPK4P31152 587 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 RANBP1P43487 201 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 RPS6KA2Q15349 733 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TCP11X2Q5H9J9 407 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 MB21D2Q8IYB1 491 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CPXCR1Q8N123 301 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ALKBH8Q96BT7 664 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ZNRF3Q9ULT6 936 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 A0A1W2PQJ5 194 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SSU72P8A0A1W2PR75 194 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 IGF2BP3O00425 579 aaKnown RBP eCLIP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SERPINB6P35237 376 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ACADSBP45954 432 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 QARSP47897 775 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 NDUFA8P51970 172 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CCDC25Q86WR0 208 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 NCAPG2Q86XI2 1143 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PDIK1LQ8N165 341 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 RIBC1Q8N443 379 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CEP170P1Q96L14 293 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TEX12Q9BXU0 123 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 KIAA1257Q9ULG3 409 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ZBTB21Q9ULJ3 1066 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TMX2Q9Y320 296 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 MORC2Q9Y6X9 1032 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 MAP3K7O43318 606 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PRPSAP2O60256 369 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 KRT37O76014 449 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 U2AF2P26368 475 aaKnown RBP eCLIP4.64□□□□□ -1.678e-7■■■□□ 15.9
VPS13C-202ENST00000261517 IFNA8P32881 189 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 RWDD2BP57060 319 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ATP2C1P98194 919 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 GABPAQ06546 454 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CEP85LQ5SZL2 805 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PNMA8AQ86V59 439 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 REM2Q8IYK8 340 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 C3orf20Q8ND61 904 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PSPC1Q8WXF1 523 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CNPY3Q9BT09 278 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 UVRAGQ9P2Y5 699 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 HOXA2O43364 376 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 NPM3O75607 178 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 DGAT1O75907 488 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 DCTN3O75935 186 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TBC1D8O95759 1140 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 DNA2P51530 1060 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ANKRD20A4Q4UJ75 823 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ANKRD20A8PQ5CZ79 823 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ANKRD20A2Q5SQ80 823 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ANKRD20A1Q5TYW2 823 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 FOXR2Q6PJQ5 311 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 RSPH1Q8WYR4 309 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CABS1Q96KC9 395 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CD209Q9NNX6 404 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 KCNJ14Q9UNX9 436 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 KARSQ15046 597 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 GEN1Q17RS7 908 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 MFN1Q8IWA4 741 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 RAD54LQ92698 747 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 JARID2Q92833 1246 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TNIP3Q96KP6 325 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 MYOM1P52179 1685 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PDXDC2PQ6P474 469 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 SIX6OS1Q8N1H7 587 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 KIFC3Q9BVG8 833 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 EIF2AQ9BY44 585 aaKnown RBP4.63□□□□□ -1.67
VPS13C-202ENST00000261517 BTBD18B2RXH4 712 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 KRT38O76015 456 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 KRT19P08727 400 aa4.63□□□□□ -1.67
VPS13C-202ENST00000261517 FCER1AP12319 257 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms