RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 FTHL17Q9BXU8 183 aa21.54■■□□□ 1.04
TM6SF1-201ENST00000258909 TMX1Q9H3N1 280 aa21.54■■□□□ 1.04
TM6SF1-201ENST00000258909 PCDHA10Q9Y5I2 948 aa21.54■■□□□ 1.04
TM6SF1-201ENST00000258909 COL1A2P08123 1366 aa21.54■■□□□ 1.04
TM6SF1-201ENST00000258909 KDM3AQ9Y4C1 1321 aa21.54■■□□□ 1.04
TM6SF1-201ENST00000258909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 MSH4O15457 936 aa21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 CSPG5O95196 566 aa21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 NEFLP07196 543 aa21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 PSAPP07602 524 aa21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 BMPR1AP36894 532 aa21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 SMAP1Q8IYB5 467 aaPredicted RBP21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 TRIM22Q8IYM9 498 aa21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 BANK1Q8NDB2 785 aa21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 TMEM40Q8WWA1 233 aa21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 NOC2LQ9Y3T9 749 aaKnown RBP21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 ATG2AQ2TAZ0 1938 aa21.53■■□□□ 1.04
TM6SF1-201ENST00000258909 CPLX1O14810 134 aa21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 GRM6O15303 877 aa21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 EPB41L2O43491 1005 aaKnown RBP21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 C22orf31O95567 290 aa21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 GATMP50440 423 aa21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 PAN2Q504Q3 1202 aaKnown RBP21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 TCEAL5Q5H9L2 206 aa21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 METTL13Q8N6R0 699 aa21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 BBXQ8WY36 941 aaPredicted RBP21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 AIFM3Q96NN9 605 aa21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 SH3GLB2Q9NR46 395 aa21.52■■□□□ 1.04
TM6SF1-201ENST00000258909 CHMP2AO43633 222 aa21.52■■□□□ 1.03
TM6SF1-201ENST00000258909 DTNBO60941 627 aa21.52■■□□□ 1.03
TM6SF1-201ENST00000258909 KIZQ2M2Z5 673 aa21.52■■□□□ 1.03
TM6SF1-201ENST00000258909 TIGD5Q53EQ6 642 aa21.52■■□□□ 1.03
TM6SF1-201ENST00000258909 CRIPAKQ8N1N5 446 aa21.52■■□□□ 1.03
TM6SF1-201ENST00000258909 TBCKQ8TEA7 893 aa21.52■■□□□ 1.03
TM6SF1-201ENST00000258909 ZNF274Q96GC6 653 aaPredicted RBP21.52■■□□□ 1.03
TM6SF1-201ENST00000258909 TM6SF1Q9BZW5 370 aa21.52■■□□□ 1.03
TM6SF1-201ENST00000258909 PDRG1Q9NUG6 133 aa21.52■■□□□ 1.03
TM6SF1-201ENST00000258909 PCDHA4Q9UN74 947 aa21.52■■□□□ 1.03
TM6SF1-201ENST00000258909 MGEA5O60502 916 aa21.51■■□□□ 1.03
TM6SF1-201ENST00000258909 RPS6KA5O75582 802 aa21.51■■□□□ 1.03
TM6SF1-201ENST00000258909 VTNP04004 478 aa21.51■■□□□ 1.03
TM6SF1-201ENST00000258909 USP11P51784 963 aa21.51■■□□□ 1.03
TM6SF1-201ENST00000258909 EP400NLQ6ZTU2 488 aa21.51■■□□□ 1.03
TM6SF1-201ENST00000258909 NPAS4Q8IUM7 802 aa21.51■■□□□ 1.03
TM6SF1-201ENST00000258909 CLP1Q92989 425 aaKnown RBP21.51■■□□□ 1.03
TM6SF1-201ENST00000258909 ERVK-5Q9HDB9 667 aa21.51■■□□□ 1.03
TM6SF1-201ENST00000258909 DISC1Q9NRI5 854 aa21.51■■□□□ 1.03
TM6SF1-201ENST00000258909 MRPL42Q9Y6G3 142 aaKnown RBP21.51■■□□□ 1.03
TM6SF1-201ENST00000258909 KIAA1671Q9BY89 1806 aa21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 WDR64B1ANS9 1081 aa21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 C5orf67F2Z3F1 127 aa21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 DEXIO95424 95 aa21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 RB1P06400 928 aa21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 OSMRQ99650 979 aa21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 C11orf84Q9BUA3 381 aaPredicted RBP21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 NSUN3Q9H649 340 aaKnown RBP21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 ALG13Q9NP73 1137 aaKnown RBP21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 ST3GAL5Q9UNP4 418 aa21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 RWDD3Q9Y3V2 267 aa21.5■■□□□ 1.03
TM6SF1-201ENST00000258909 H3BQ06 376 aaPredicted RBP21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 ZNF862O60290 1169 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 GAS7O60861 476 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 TDP2O95551 362 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 STAG3L1P0CL83 205 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 CLCN3P51790 818 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 UGCGQ16739 394 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 LEXMQ3ZCV2 418 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 BLIDQ8IZY5 108 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 SLC5A5Q92911 643 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 UNC45AQ9H3U1 944 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 LRFN2Q9ULH4 789 aa21.49■■□□□ 1.03
TM6SF1-201ENST00000258909 LRCH2Q5VUJ6 765 aa21.48■■□□□ 1.03
TM6SF1-201ENST00000258909 CMTR2Q8IYT2 770 aaKnown RBP21.48■■□□□ 1.03
TM6SF1-201ENST00000258909 LRRC71Q8N4P6 559 aa21.48■■□□□ 1.03
TM6SF1-201ENST00000258909 ZNF668Q96K58 619 aaPredicted RBP21.48■■□□□ 1.03
TM6SF1-201ENST00000258909 ADAM2Q99965 735 aa21.48■■□□□ 1.03
TM6SF1-201ENST00000258909 TEKT3Q9BXF9 490 aa21.48■■□□□ 1.03
TM6SF1-201ENST00000258909 KCNJ14Q9UNX9 436 aa21.48■■□□□ 1.03
TM6SF1-201ENST00000258909 DENND3A2RUS2 1198 aa21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 GPR32O75388 356 aa21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 IL9P15248 144 aa21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 CRYBB1P53674 252 aaPredicted RBP21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 PRKCEQ02156 737 aa21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 NPY5RQ15761 445 aa21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 EFCAB12Q6NXP0 572 aa21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 CPLX2Q6PUV4 134 aaKnown RBP21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 FAM228AQ86W67 206 aa21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 RIT2Q99578 217 aa21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 CD320Q9NPF0 282 aa21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 CEP131Q9UPN4 1083 aa21.47■■□□□ 1.03
TM6SF1-201ENST00000258909 M0R2N6 131 aa21.46■■□□□ 1.03
TM6SF1-201ENST00000258909 OATP04181 439 aa21.46■■□□□ 1.03
TM6SF1-201ENST00000258909 SARSP49591 514 aaKnown RBP21.46■■□□□ 1.03
TM6SF1-201ENST00000258909 SCRN1Q12765 414 aa21.46■■□□□ 1.03
TM6SF1-201ENST00000258909 PTCRAQ6ISU1 281 aaPredicted RBP21.46■■□□□ 1.03
TM6SF1-201ENST00000258909 FAM167AQ96KS9 214 aa21.46■■□□□ 1.03
TM6SF1-201ENST00000258909 CLDND1Q9NY35 253 aa21.46■■□□□ 1.03
TM6SF1-201ENST00000258909 PLAGL2Q9UPG8 496 aa21.46■■□□□ 1.03
TM6SF1-201ENST00000258909 AKT3Q9Y243 479 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms