RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 FAM153BP0C7A2 387 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 KLRC1P26715 233 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 ZNF131P52739 623 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 ARHGAP4P98171 946 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 FAM153CQ494X1 144 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 SLC35C1Q96A29 364 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 MASTLQ96GX5 879 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 LRRC1Q9BTT6 524 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 PSTPIP2Q9H939 334 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 FAM153AQ9UHL3 310 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 PCDHA13Q9Y5I0 950 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 GRIN2DO15399 1336 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 HSF2BPO75031 334 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 KIF11P52732 1056 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 GHRHRQ02643 423 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 WHAMMP3Q1A5X7 153 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.08□□□□□ -0.8
RPA1-201ENST00000254719 MMRN2Q9H8L6 949 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 HDAC9Q9UKV0 1011 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 PRR12Q9ULL5 1215 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 DICER1Q9UPY3 1922 aaKnown RBP10.08□□□□□ -0.8
RPA1-201ENST00000254719 RPTORQ8N122 1335 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 MYO15AQ9UKN7 3530 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 SPDYE3A6NKU9 549 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 GLI1P08151 1106 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 PLA2G4BP0C869 781 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 CXCR5P32302 372 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 DNAJC21Q5F1R6 531 aaKnown RBP10.08□□□□□ -0.8
RPA1-201ENST00000254719 ZFYVE27Q5T4F4 411 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 SNX29Q8TEQ0 813 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 NOC4LQ9BVI4 516 aaKnown RBP10.08□□□□□ -0.8
RPA1-201ENST00000254719 NT5C3AQ9H0P0 336 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 NEUROG2Q9H2A3 272 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 DHX36Q9H2U1 1008 aaKnown RBP10.08□□□□□ -0.8
RPA1-201ENST00000254719 FBXO28Q9NVF7 368 aa10.08□□□□□ -0.8
RPA1-201ENST00000254719 GOLGA6L10A0A0M3HER8 536 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 GRID2IPA4D2P6 1211 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 GNA14O95837 355 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 RPA1P27694 616 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 USP11P51784 963 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 VAV2P52735 878 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 CBWD6Q4V339 395 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 CBWD3Q5JTY5 395 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 CBWD5Q5RIA9 395 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 CCDC122Q5T0U0 273 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 PODNQ7Z5L7 613 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 PACS2Q86VP3 889 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 CPNE8Q86YQ8 564 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 SH3GL2Q99962 352 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 R3HDMLQ9H3Y0 253 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 HPCAL4Q9UM19 191 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 PCDHGC5Q9Y5F6 944 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 DESP17661 470 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 PON1P27169 355 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 WNT7BP56706 349 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 MRPS9P82933 396 aaKnown RBP10.07□□□□□ -0.8
RPA1-201ENST00000254719 C2orf54Q08AI8 447 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 SF3B2Q13435 895 aaKnown RBP10.07□□□□□ -0.8
RPA1-201ENST00000254719 ZC2HC1CQ53FD0 456 aaPredicted RBP10.07□□□□□ -0.8
RPA1-201ENST00000254719 HS2ST1Q7LGA3 356 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 LNX1Q8TBB1 728 aaPredicted RBP10.07□□□□□ -0.8
RPA1-201ENST00000254719 TMEM174Q8WUU8 243 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 RANBP17Q9H2T7 1088 aaKnown RBP10.07□□□□□ -0.8
RPA1-201ENST00000254719 EPB41L4BQ9H329 900 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 SEPT11Q9NVA2 429 aaKnown RBP10.07□□□□□ -0.8
RPA1-201ENST00000254719 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
RPA1-201ENST00000254719 RRP15Q9Y3B9 282 aaKnown RBP10.07□□□□□ -0.8
RPA1-201ENST00000254719 PCDHA1Q9Y5I3 950 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 ARP10275 920 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 TNNI2P48788 182 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 TCERG1LQ5VWI1 586 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 MOXD1Q6UVY6 613 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 ANKRD13CQ8N6S4 541 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 RETREG2Q8NC44 543 aa10.07□□□□□ -0.8
RPA1-201ENST00000254719 PACSIN2Q9UNF0 486 aaPredicted RBP10.07□□□□□ -0.8
RPA1-201ENST00000254719 PFASO15067 1338 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 KDM3AQ9Y4C1 1321 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 TMEM150BA6NC51 233 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 GH2P01242 217 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 CASP8Q14790 479 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 CCDC170Q8IYT3 715 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 SPICE1Q8N0Z3 855 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 HAUS4Q9H6D7 363 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 PCDHA3Q9Y5H8 950 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 H0YGN5 161 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 RGS20O76081 388 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 KRT13P13646 458 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 PTGER2P43116 358 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 DLG4P78352 724 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 PTK2Q05397 1052 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 LRRC63Q05C16 580 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 ITGB3BPQ13352 177 aaPredicted RBP10.06□□□□□ -0.8
RPA1-201ENST00000254719 FAM83BQ5T0W9 1011 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 RINT1Q6NUQ1 792 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 CCNI2Q6ZMN8 369 aaPredicted RBP10.06□□□□□ -0.8
RPA1-201ENST00000254719 SLFN11Q7Z7L1 901 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 ARFGAP2Q8N6H7 521 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 RBM12Q9NTZ6 932 aaKnown RBP10.06□□□□□ -0.8
RPA1-201ENST00000254719 NFS1Q9Y697 457 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 SPDYE2BA6NHP3 402 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms