RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PRDM12Q9H4Q4 367 aa25.87■■□□□ 1.73
LSM4-201ENST00000252816 TRPV2Q9Y5S1 764 aa25.87■■□□□ 1.73
LSM4-201ENST00000252816 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.86■■□□□ 1.73
LSM4-201ENST00000252816 KIF28PB7ZC32 967 aa25.86■■□□□ 1.73
LSM4-201ENST00000252816 TLL1O43897 1013 aa25.86■■□□□ 1.73
LSM4-201ENST00000252816 ST18O60284 1047 aa25.86■■□□□ 1.73
LSM4-201ENST00000252816 GJB5O95377 273 aa25.86■■□□□ 1.73
LSM4-201ENST00000252816 HMGN5P82970 282 aaKnown RBP25.86■■□□□ 1.73
LSM4-201ENST00000252816 PPP2R5CQ13362 524 aa25.86■■□□□ 1.73
LSM4-201ENST00000252816 FAM117BQ6P1L5 589 aa25.86■■□□□ 1.73
LSM4-201ENST00000252816 NME8Q8N427 588 aa25.86■■□□□ 1.73
LSM4-201ENST00000252816 APBB2Q92870 758 aa25.86■■□□□ 1.73
LSM4-201ENST00000252816 AGO3Q9H9G7 860 aaKnown RBP25.86■■□□□ 1.73
LSM4-201ENST00000252816 MYO9BQ13459 2157 aa25.86■■□□□ 1.73
LSM4-201ENST00000252816 LCHNA4D1U4 455 aa25.85■■□□□ 1.73
LSM4-201ENST00000252816 TBX3O15119 743 aa25.85■■□□□ 1.73
LSM4-201ENST00000252816 FOSL2P15408 326 aa25.85■■□□□ 1.73
LSM4-201ENST00000252816 TSHZ1Q6ZSZ6 1077 aa25.85■■□□□ 1.73
LSM4-201ENST00000252816 MYOCDQ8IZQ8 938 aa25.85■■□□□ 1.73
LSM4-201ENST00000252816 ZBED2Q9BTP6 218 aa25.85■■□□□ 1.73
LSM4-201ENST00000252816 CELF4Q9BZC1 486 aaKnown RBP25.85■■□□□ 1.73
LSM4-201ENST00000252816 NRBP2Q9NSY0 501 aa25.85■■□□□ 1.73
LSM4-201ENST00000252816 CEP131Q9UPN4 1083 aa25.85■■□□□ 1.73
LSM4-201ENST00000252816 STBD1O95210 358 aa25.84■■□□□ 1.73
LSM4-201ENST00000252816 AMHP03971 560 aa25.84■■□□□ 1.73
LSM4-201ENST00000252816 TAP1Q03518 808 aa25.84■■□□□ 1.73
LSM4-201ENST00000252816 FBXO18Q8NFZ0 1043 aa25.84■■□□□ 1.73
LSM4-201ENST00000252816 KDM3AQ9Y4C1 1321 aa25.84■■□□□ 1.73
LSM4-201ENST00000252816 M0QZ92 97 aa25.83■■□□□ 1.73
LSM4-201ENST00000252816 CD52P31358 61 aa25.83■■□□□ 1.73
LSM4-201ENST00000252816 SAFBQ15424 915 aaKnown RBP eCLIP25.83■■□□□ 1.73
LSM4-201ENST00000252816 METTL13Q8N6R0 699 aa25.83■■□□□ 1.73
LSM4-201ENST00000252816 BANK1Q8NDB2 785 aa25.83■■□□□ 1.73
LSM4-201ENST00000252816 RAD9AQ99638 391 aa25.83■■□□□ 1.73
LSM4-201ENST00000252816 CDHR5Q9HBB8 845 aa25.83■■□□□ 1.73
LSM4-201ENST00000252816 SQORQ9Y6N5 450 aa25.83■■□□□ 1.73
LSM4-201ENST00000252816 EVPLQ92817 2033 aa25.82■■□□□ 1.72
LSM4-201ENST00000252816 TMEM150BA6NC51 233 aa25.82■■□□□ 1.72
LSM4-201ENST00000252816 TARBP2Q15633 366 aaKnown RBP25.82■■□□□ 1.72
LSM4-201ENST00000252816 SPRED2Q7Z698 418 aa25.82■■□□□ 1.72
LSM4-201ENST00000252816 LINC01465Q8N7H1 131 aa25.82■■□□□ 1.72
LSM4-201ENST00000252816 FAM184AQ8NB25 1140 aa25.82■■□□□ 1.72
LSM4-201ENST00000252816 TMX3Q96JJ7 454 aa25.82■■□□□ 1.72
LSM4-201ENST00000252816 CERS4Q9HA82 394 aa25.82■■□□□ 1.72
LSM4-201ENST00000252816 PRUNE2Q8WUY3 3088 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 MAGEB2O15479 319 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 MARCH6O60337 910 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 CLCN3P51790 818 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 SPIRE1Q08AE8 756 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 ADGRE1Q14246 886 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 XKR3Q5GH77 459 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 LRRC71Q8N4P6 559 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 TOP1MTQ969P6 601 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 PPP1R16BQ96T49 567 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 NIFKQ9BYG3 293 aaKnown RBP25.81■■□□□ 1.72
LSM4-201ENST00000252816 SEPT9Q9UHD8 586 aaPredicted RBP25.81■■□□□ 1.72
LSM4-201ENST00000252816 GINS2Q9Y248 185 aa25.81■■□□□ 1.72
LSM4-201ENST00000252816 VTNP04004 478 aa25.8■■□□□ 1.72
LSM4-201ENST00000252816 PSMC5P62195 406 aa25.8■■□□□ 1.72
LSM4-201ENST00000252816 EFCAB12Q6NXP0 572 aa25.8■■□□□ 1.72
LSM4-201ENST00000252816 SLFN12Q8IYM2 578 aa25.8■■□□□ 1.72
LSM4-201ENST00000252816 USP38Q8NB14 1042 aa25.8■■□□□ 1.72
LSM4-201ENST00000252816 IL27Q8NEV9 243 aa25.8■■□□□ 1.72
LSM4-201ENST00000252816 MAFAQ8NHW3 353 aaPredicted RBP25.8■■□□□ 1.72
LSM4-201ENST00000252816 LINC01599Q8WXQ3 324 aa25.8■■□□□ 1.72
LSM4-201ENST00000252816 CEP89Q96ST8 783 aa25.8■■□□□ 1.72
LSM4-201ENST00000252816 PADI3Q9ULW8 664 aa25.8■■□□□ 1.72
LSM4-201ENST00000252816 EPOPA6NHQ4 379 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 ENPP3O14638 875 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 UPP2O95045 317 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 BAG4O95429 457 aaKnown RBP25.79■■□□□ 1.72
LSM4-201ENST00000252816 ATP2B1P20020 1258 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 HTRA4P83105 476 aaPredicted RBP25.79■■□□□ 1.72
LSM4-201ENST00000252816 CALCRLQ16602 461 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 KIZQ2M2Z5 673 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 TMEM266Q2M3C6 531 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 TMEM40Q8WWA1 233 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 GAS2L1Q99501 681 aaPredicted RBP25.79■■□□□ 1.72
LSM4-201ENST00000252816 SH2D3AQ9BRG2 576 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 BACH2Q9BYV9 841 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 FOXP1Q9H334 677 aaPredicted RBP25.79■■□□□ 1.72
LSM4-201ENST00000252816 WRAP73Q9P2S5 460 aaPredicted RBP25.79■■□□□ 1.72
LSM4-201ENST00000252816 TRANK1O15050 2925 aa25.79■■□□□ 1.72
LSM4-201ENST00000252816 DDX11L8A8MPP1 907 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 RFXAPO00287 272 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 NEMFO60524 1076 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 GPR32O75388 356 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 P4HBP07237 508 aaKnown RBP25.78■■□□□ 1.72
LSM4-201ENST00000252816 QARSP47897 775 aaKnown RBP25.78■■□□□ 1.72
LSM4-201ENST00000252816 EPHA7Q15375 998 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 MTERF2Q49AM1 385 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 NCAPH2Q6IBW4 605 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 ANO5Q75V66 913 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 RTN4RL1Q86UN2 441 aaPredicted RBP25.78■■□□□ 1.72
LSM4-201ENST00000252816 MTMR9Q96QG7 549 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 TMEM60Q9H2L4 133 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 NOC2LQ9Y3T9 749 aaKnown RBP25.78■■□□□ 1.72
LSM4-201ENST00000252816 INSL6Q9Y581 213 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 LOXHD1Q8IVV2 1947 aa25.78■■□□□ 1.72
LSM4-201ENST00000252816 TBC1D8BQ0IIM8 1120 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms