RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ARP10275 920 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 EPB41P11171 864 aaKnown RBP21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 GAP43P17677 238 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 PRELPP51888 382 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 SLC15A2Q16348 729 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 SPDYE2Q495Y8 402 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 CEP55Q53EZ4 464 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 MYCT1Q8N699 235 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 FAM71BQ8TC56 605 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 CHURC1Q8WUH1 139 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 BORCS6Q96GS4 357 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 SPAG5Q96R06 1193 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 VEZTQ9HBM0 779 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 METTL14Q9HCE5 456 aaKnown RBP21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 PCDHB13Q9Y5F0 798 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 PCDHGC5Q9Y5F6 944 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 GAS7O60861 476 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 AARSP49588 968 aaKnown RBP eCLIP21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 SLC7A5Q01650 507 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 KSR1Q8IVT5 923 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 FIZ1Q96SL8 496 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 ACBD3Q9H3P7 528 aa21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 RBM12Q9NTZ6 932 aaKnown RBP21.41■■□□□ 1.02
CDC42EP1-201ENST00000249014 MYH11P35749 1972 aa21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 EIF3DO15371 548 aaKnown RBP eCLIP21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 SYF2O95926 243 aaKnown RBP21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 HSP90B2PQ58FF3 399 aa21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 CCDC70Q6NSX1 233 aa21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 TEX2Q8IWB9 1127 aa21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 AENQ8WTP8 325 aaKnown RBP21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 UNC45AQ9H3U1 944 aa21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 MED4Q9NPJ6 270 aa21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 PSD3Q9NYI0 1048 aa21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 TSKSQ9UJT2 592 aa21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 MRPL11Q9Y3B7 192 aaKnown RBP21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 RGPD3A6NKT7 1758 aaPredicted RBP21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 RGPD4Q7Z3J3 1758 aa21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 PAFAH1B1P43034 410 aa21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 ZNF772Q68DY9 489 aaPredicted RBP21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 ZNF277Q9NRM2 450 aaPredicted RBP21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 PACSIN2Q9UNF0 486 aaPredicted RBP21.4■■□□□ 1.02
CDC42EP1-201ENST00000249014 CCDC66A2RUB6 948 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 DNA2P51530 1060 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 COG2Q14746 738 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 MEI1Q5TIA1 1274 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 GJB7Q6PEY0 223 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 GBP6Q6ZN66 633 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 LDHDQ86WU2 507 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 DNAAF5Q86Y56 855 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 OGFOD1Q8N543 542 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 ZNF577Q9BSK1 485 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 PARVGQ9HBI0 331 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 GCNT4Q9P109 453 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 FRMPD4Q14CM0 1322 aa21.39■■□□□ 1.01
CDC42EP1-201ENST00000249014 GRID2IPA4D2P6 1211 aa21.38■■□□□ 1.01
CDC42EP1-201ENST00000249014 LMAN1P49257 510 aa21.38■■□□□ 1.01
CDC42EP1-201ENST00000249014 JAM2P57087 298 aa21.38■■□□□ 1.01
CDC42EP1-201ENST00000249014 LARGE2Q8N3Y3 721 aa21.38■■□□□ 1.01
CDC42EP1-201ENST00000249014 SHTN1A0MZ66 631 aa21.38■■□□□ 1.01
CDC42EP1-201ENST00000249014 PLA2G6O60733 806 aa21.38■■□□□ 1.01
CDC42EP1-201ENST00000249014 CAP2P40123 477 aa21.38■■□□□ 1.01
CDC42EP1-201ENST00000249014 B3GNT9Q6UX72 402 aa21.38■■□□□ 1.01
CDC42EP1-201ENST00000249014 FBXL5Q9UKA1 691 aa21.38■■□□□ 1.01
CDC42EP1-201ENST00000249014 ZNF131P52739 623 aa21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 CFAP221Q4G0U5 840 aa21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 ZNF720Q7Z2F6 126 aa21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 RIN2Q8WYP3 895 aaPredicted RBP21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 PDGFDQ9GZP0 370 aaPredicted RBP21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 NAGPAQ9UK23 515 aa21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 BZW2Q9Y6E2 419 aaKnown RBP21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 TBC1D12O60347 775 aa21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 PRKCIP41743 596 aa21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 FAM160B2Q86V87 743 aa21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 FAM186BQ8IYM0 893 aa21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 NACC1Q96RE7 527 aa21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 EHMT1Q9H9B1 1298 aa21.37■■□□□ 1.01
CDC42EP1-201ENST00000249014 BTNL10A8MVZ5 291 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 AGPSO00116 658 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 PSMC2P35998 433 aaKnown RBP21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 HNRNPH2P55795 449 aaKnown RBP21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 NFIL3Q16649 462 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 TTLL6Q8N841 843 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 RUBCNQ92622 972 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 AGBL1Q96MI9 1066 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 WDR11Q9BZH6 1224 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 STIM2Q9P246 746 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 FEM1BQ9UK73 627 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 GTPBP10A4D1E9 387 aaKnown RBP21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 IPO5O00410 1097 aaKnown RBP21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 RNF40O75150 1001 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 GGCXP38435 758 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 C10orf76Q5T2E6 689 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 FAM178BQ8IXR5 827 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 BANK1Q8NDB2 785 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 PSMD1Q99460 953 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 LXNQ9BS40 222 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 RNF14Q9UBS8 474 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 NENFQ9UMX5 172 aa21.36■■□□□ 1.01
CDC42EP1-201ENST00000249014 LOXHD1Q8IVV2 1947 aa21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 A0A0U1RQG5 324 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms