RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 ZNF600Q6ZNG1 722 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 CCAR2Q8N163 923 aaKnown RBP9.06□□□□□ -0.96
SPARC-201ENST00000231061 CCDC148Q8NFR7 591 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 MDM1Q8TC05 714 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 SLC22A8Q8TCC7 542 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 SLC7A3Q8WY07 619 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 TCF12Q99081 682 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 TCP11L1Q9NUJ3 509 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 ZNF215Q9UL58 517 aaPredicted RBP9.06□□□□□ -0.96
SPARC-201ENST00000231061 TTLL3Q9Y4R7 772 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 CLASP2O75122 1294 aaKnown RBP9.06□□□□□ -0.96
SPARC-201ENST00000231061 SERPINC1P01008 464 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 PCCAP05165 728 aaPredicted RBP9.06□□□□□ -0.96
SPARC-201ENST00000231061 C7P10643 843 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 KRT13P13646 458 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 EZRP15311 586 aaKnown RBP9.06□□□□□ -0.96
SPARC-201ENST00000231061 PSMC4P43686 418 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 NEK3P51956 506 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 ITGB3BPQ13352 177 aaPredicted RBP9.06□□□□□ -0.96
SPARC-201ENST00000231061 ELF2Q15723 593 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 LETM2Q2VYF4 491 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 RILPL1Q5EBL4 403 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 DNAJB7Q7Z6W7 309 aaPredicted RBP9.06□□□□□ -0.96
SPARC-201ENST00000231061 VPS37DQ86XT2 251 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 HOMER1Q86YM7 354 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 TBC1D10CQ8IV04 446 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 AADATQ8N5Z0 425 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 TEKT4Q8WW24 435 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 TSGA13Q96PP4 275 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 GREM2Q9H772 168 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 ATP13A3Q9H7F0 1226 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 MYO1AQ9UBC5 1043 aa9.06□□□□□ -0.96
SPARC-201ENST00000231061 ANGEL1Q9UNK9 670 aaKnown RBP9.06□□□□□ -0.96
SPARC-201ENST00000231061 PCP4L1A6NKN8 68 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 DNAJC6O75061 913 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 KRT20P35900 424 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 KRT40Q6A162 431 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 NLRP14Q86W24 1093 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 BCL7CQ8WUZ0 217 aaPredicted RBP9.05□□□□□ -0.96
SPARC-201ENST00000231061 PBXIP1Q96AQ6 731 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 AIDAQ96BJ3 306 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 SERINC2Q96SA4 455 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 PCDHGB3Q9Y5G1 929 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 ALS2Q96Q42 1657 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 MROH7-TTC4A0A0A0MT08 1334 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 TARSL2A2RTX5 802 aaKnown RBP9.05□□□□□ -0.96
SPARC-201ENST00000231061 TOR1BO14657 336 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 PLSCR1O15162 318 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 GUCA1CO95843 209 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 CD9P21926 228 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 FGFR4P22455 802 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 SKOR1P84550 965 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 SAFBQ15424 915 aaKnown RBP eCLIP9.05□□□□□ -0.96
SPARC-201ENST00000231061 MTERF2Q49AM1 385 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 TMEM67Q5HYA8 995 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 BEND6Q5SZJ8 279 aaPredicted RBP9.05□□□□□ -0.96
SPARC-201ENST00000231061 CYB5R4Q7L1T6 521 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 CCDC50Q8IVM0 306 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 ZBTB38Q8NAP3 1195 aaPredicted RBP9.05□□□□□ -0.96
SPARC-201ENST00000231061 ALKBH8Q96BT7 664 aaKnown RBP9.05□□□□□ -0.96
SPARC-201ENST00000231061 MOGAT1Q96PD6 335 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 FAM167BQ9BTA0 163 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 NRDE2Q9H7Z3 1164 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 PARVGQ9HBI0 331 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 ZMYM6O95789 1325 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 ZNF532Q9HCE3 1301 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 HDAC3O15379 428 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 ZBTB43O43298 467 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 ETV3P41162 512 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 IARSP41252 1262 aaKnown RBP9.05□□□□□ -0.96
SPARC-201ENST00000231061 EVCP57679 992 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 DSTNP60981 165 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 CCDC40Q4G0X9 1142 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 PPHLN1Q8NEY8 458 aaKnown RBP9.05□□□□□ -0.96
SPARC-201ENST00000231061 SNX27Q96L92 541 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 CLIC6Q96NY7 704 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 ACAP3Q96P50 834 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 SLC26A6Q9BXS9 759 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 PIH1D3Q9NQM4 214 aaKnown RBP9.05□□□□□ -0.96
SPARC-201ENST00000231061 TRMT112Q9UI30 125 aaKnown RBP9.05□□□□□ -0.96
SPARC-201ENST00000231061 FBXO2Q9UK22 296 aaPredicted RBP9.05□□□□□ -0.96
SPARC-201ENST00000231061 PHF24Q9UPV7 400 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 LAMA4Q16363 1823 aa9.05□□□□□ -0.96
SPARC-201ENST00000231061 CCDC163A0A0D9SF12 145 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 SFI1A8K8P3 1242 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 PRPF3O43395 683 aaKnown RBP9.04□□□□□ -0.96
SPARC-201ENST00000231061 STARD3NLO95772 234 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 CMA1P23946 247 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 FANCCQ00597 558 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 KLC1Q07866 573 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 PNOCQ13519 176 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 BYSLQ13895 437 aaKnown RBP9.04□□□□□ -0.96
SPARC-201ENST00000231061 CFAP100Q494V2 611 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 WDR45BQ5MNZ6 344 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 OLFM4Q6UX06 510 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 BTNL9Q6UXG8 535 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 IFNL1Q8IU54 200 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 CNDP1Q96KN2 507 aa9.04□□□□□ -0.96
SPARC-201ENST00000231061 ZBTB21Q9ULJ3 1066 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms